Strain Fitness in Pseudomonas simiae WCS417 around PS417_11580
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,487,782 | + | PS417_11575 | 0.27 | +0.4 | |
2,487,783 | - | +0.6 | |||
2,487,783 | - | PS417_11575 | 0.27 | +0.1 | |
2,488,373 | + | +1.0 | |||
2,488,373 | + | PS417_11575 | 0.84 | -0.3 | |
2,488,373 | + | PS417_11575 | 0.84 | -0.2 | |
2,488,501 | - | -0.7 | |||
2,488,680 | + | +0.3 | |||
2,488,732 | - | -0.3 | |||
2,488,761 | - | +2.0 | |||
2,489,323 | + | +0.0 | |||
2,489,725 | + | -0.6 | |||
2,489,725 | + | +0.5 | |||
2,489,726 | - | +1.0 | |||
2,489,826 | + | PS417_11585 | 0.24 | -0.9 | |
2,490,001 | + | PS417_11585 | 0.51 | -1.0 | |
2,490,001 | + | PS417_11585 | 0.51 | -3.2 | |
2,490,225 | - | PS417_11585 | 0.84 | -1.3 |
Or see this region's nucleotide sequence