Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11525 and PS417_11530 are separated by 147 nucleotides PS417_11530 and PS417_11535 are separated by 11 nucleotides PS417_11535 and PS417_11540 are separated by 1 nucleotides PS417_11540 and PS417_11545 are separated by 34 nucleotides
PS417_11525: PS417_11525 - ADP-ribose pyrophosphatase, at 2,478,536 to 2,479,228
_11525
PS417_11530: PS417_11530 - amidase, at 2,479,376 to 2,480,023
_11530
PS417_11535: PS417_11535 - nicotinate phosphoribosyltransferase, at 2,480,035 to 2,481,252
_11535
PS417_11540: PS417_11540 - NAD synthetase, at 2,481,254 to 2,482,063
_11540
PS417_11545: PS417_11545 - spermidine/putrescine ABC transporter substrate-binding protein, at 2,482,098 to 2,483,129
_11545
Position (kb)
2480
2481
2482 Strain fitness (log2 ratio)
-2
-1
0
1 at 2479.281 kb on - strand at 2479.304 kb on - strand at 2479.496 kb on + strand, within PS417_11530 at 2479.497 kb on - strand, within PS417_11530 at 2479.497 kb on - strand, within PS417_11530 at 2479.697 kb on + strand, within PS417_11530 at 2479.697 kb on + strand, within PS417_11530 at 2479.698 kb on - strand, within PS417_11530 at 2479.922 kb on - strand, within PS417_11530 at 2480.092 kb on + strand at 2480.093 kb on - strand at 2480.093 kb on - strand at 2480.096 kb on - strand at 2480.096 kb on - strand at 2480.288 kb on - strand, within PS417_11535 at 2480.341 kb on + strand, within PS417_11535 at 2480.373 kb on + strand, within PS417_11535 at 2480.503 kb on + strand, within PS417_11535 at 2480.664 kb on + strand, within PS417_11535 at 2480.885 kb on - strand, within PS417_11535 at 2480.885 kb on - strand, within PS417_11535 at 2481.211 kb on + strand at 2481.212 kb on - strand at 2481.926 kb on + strand, within PS417_11540 at 2481.926 kb on + strand, within PS417_11540 at 2481.926 kb on + strand, within PS417_11540 at 2481.927 kb on - strand, within PS417_11540 at 2481.932 kb on + strand, within PS417_11540 at 2481.933 kb on - strand, within PS417_11540 at 2481.945 kb on - strand, within PS417_11540 at 2482.061 kb on + strand at 2482.061 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 2,479,281 - -2.5 2,479,304 - -2.7 2,479,496 + PS417_11530 0.19 -2.0 2,479,497 - PS417_11530 0.19 -2.1 2,479,497 - PS417_11530 0.19 -1.6 2,479,697 + PS417_11530 0.50 -1.8 2,479,697 + PS417_11530 0.50 -1.7 2,479,698 - PS417_11530 0.50 -2.4 2,479,922 - PS417_11530 0.84 -1.6 2,480,092 + +0.0 2,480,093 - -0.2 2,480,093 - +0.3 2,480,096 - +0.4 2,480,096 - -0.3 2,480,288 - PS417_11535 0.21 +0.8 2,480,341 + PS417_11535 0.25 +0.0 2,480,373 + PS417_11535 0.28 -0.4 2,480,503 + PS417_11535 0.38 -0.5 2,480,664 + PS417_11535 0.52 +0.8 2,480,885 - PS417_11535 0.70 +1.4 2,480,885 - PS417_11535 0.70 -0.6 2,481,211 + +0.1 2,481,212 - +0.2 2,481,926 + PS417_11540 0.83 -2.3 2,481,926 + PS417_11540 0.83 +0.5 2,481,926 + PS417_11540 0.83 +0.8 2,481,927 - PS417_11540 0.83 +0.9 2,481,932 + PS417_11540 0.84 -0.8 2,481,933 - PS417_11540 0.84 -0.6 2,481,945 - PS417_11540 0.85 -0.8 2,482,061 + -0.0 2,482,061 + +0.7
Or see this region's nucleotide sequence