Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11090 and PS417_11095 are separated by 162 nucleotides PS417_11095 and PS417_11100 are separated by 93 nucleotides PS417_11100 and PS417_11105 are separated by 2 nucleotides
PS417_11090: PS417_11090 - LacI family transcriptional regulator, at 2,377,753 to 2,378,802
_11090
PS417_11095: PS417_11095 - fatty acid desaturase, at 2,378,965 to 2,380,059
_11095
PS417_11100: PS417_11100 - MocE, at 2,380,153 to 2,380,473
_11100
PS417_11105: PS417_11105 - pyridine nucleotide-disulfide oxidoreductase, at 2,380,476 to 2,381,675
_11105
Position (kb)
2378
2379
2380
2381 Strain fitness (log2 ratio)
-1
0
1
2 at 2378.032 kb on + strand, within PS417_11090 at 2378.153 kb on + strand, within PS417_11090 at 2378.296 kb on + strand, within PS417_11090 at 2378.300 kb on + strand, within PS417_11090 at 2378.301 kb on - strand, within PS417_11090 at 2378.911 kb on + strand at 2378.961 kb on - strand at 2379.085 kb on - strand, within PS417_11095 at 2379.182 kb on - strand, within PS417_11095 at 2379.606 kb on + strand, within PS417_11095 at 2379.637 kb on + strand, within PS417_11095 at 2379.698 kb on + strand, within PS417_11095 at 2379.778 kb on + strand at 2379.779 kb on - strand, within PS417_11095 at 2379.779 kb on - strand, within PS417_11095 at 2379.802 kb on - strand, within PS417_11095 at 2379.805 kb on + strand, within PS417_11095 at 2379.821 kb on - strand at 2379.821 kb on - strand, within PS417_11095 at 2379.842 kb on - strand, within PS417_11095 at 2379.842 kb on - strand, within PS417_11095 at 2379.911 kb on - strand, within PS417_11095 at 2379.931 kb on + strand, within PS417_11095 at 2379.931 kb on + strand, within PS417_11095 at 2379.932 kb on - strand, within PS417_11095 at 2380.137 kb on - strand at 2380.237 kb on + strand, within PS417_11100 at 2380.238 kb on - strand, within PS417_11100 at 2380.238 kb on - strand, within PS417_11100
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 2,378,032 + PS417_11090 0.27 +1.2 2,378,153 + PS417_11090 0.38 +1.2 2,378,296 + PS417_11090 0.52 -0.1 2,378,300 + PS417_11090 0.52 -0.6 2,378,301 - PS417_11090 0.52 +1.4 2,378,911 + -0.3 2,378,961 - +0.5 2,379,085 - PS417_11095 0.11 -0.3 2,379,182 - PS417_11095 0.20 +0.5 2,379,606 + PS417_11095 0.59 +0.1 2,379,637 + PS417_11095 0.61 +0.9 2,379,698 + PS417_11095 0.67 -0.4 2,379,778 + -1.0 2,379,779 - PS417_11095 0.74 +0.5 2,379,779 - PS417_11095 0.74 +1.0 2,379,802 - PS417_11095 0.76 -0.7 2,379,805 + PS417_11095 0.77 -0.7 2,379,821 - +0.0 2,379,821 - PS417_11095 0.78 -0.5 2,379,842 - PS417_11095 0.80 +1.4 2,379,842 - PS417_11095 0.80 +0.4 2,379,911 - PS417_11095 0.86 -0.1 2,379,931 + PS417_11095 0.88 +0.2 2,379,931 + PS417_11095 0.88 +1.8 2,379,932 - PS417_11095 0.88 -0.7 2,380,137 - -0.3 2,380,237 + PS417_11100 0.26 +0.0 2,380,238 - PS417_11100 0.26 +0.3 2,380,238 - PS417_11100 0.26 -0.1
Or see this region's nucleotide sequence