Strain Fitness in Pseudomonas simiae WCS417 around PS417_09960

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
2,146,608	+				+0.3
2,146,608	+				+1.6
2,146,654	+				+0.4
2,146,654	+				+0.0
2,146,655	-				-0.4
2,146,655	-				-1.1
2,146,748	+				-0.3
2,146,749	-				+0.2
2,146,754	+				+0.2
2,146,755	-				+0.6
2,146,758	-				+1.5
2,146,759	+				+1.0
2,146,759	+				-0.5
2,146,759	+				-0.2
2,146,759	+				-1.3
2,146,759	+				-1.5
2,146,759	+				+0.9
2,146,760	-				-0.1
2,146,760	-				-0.4
2,146,760	-				-0.1
2,146,760	-				-0.1
2,146,760	-				+0.2
2,146,841	-				+0.5
2,146,841	-				+0.7
2,146,853	+				-0.0
2,146,853	+				-0.1
2,146,854	-				-0.4
2,146,857	-				+1.7
2,146,878	+				+0.5
2,146,884	-				-1.2
2,146,950	+				+0.2
2,146,966	-				-2.4
2,146,984	+				+1.0
2,147,014	+				-0.2
2,147,053	-				-0.9
2,147,093	+				-0.5
2,147,093	+				+0.6
2,147,094	-				-0.7
2,147,146	+		PS417_09955	0.12	-0.2
2,147,146	+		PS417_09955	0.12	-1.5
2,147,204	+		PS417_09955	0.38	+0.5
2,147,204	+		PS417_09955	0.38	+0.5
2,147,205	-		PS417_09955	0.39	+1.2
2,147,205	-		PS417_09955	0.39	-0.9
2,147,205	-		PS417_09955	0.39	-0.1
2,147,251	+		PS417_09955	0.60	+1.9
2,147,251	+		PS417_09955	0.60	-0.6
2,147,252	-		PS417_09955	0.60	+0.6
2,147,292	+		PS417_09955	0.79	+0.3
2,147,293	-		PS417_09955	0.79	-0.1
2,147,293	-		PS417_09955	0.79	+2.6
2,147,322	+				-0.3
2,147,338	+				-0.3
2,147,434	-				+0.2
2,147,443	-				-0.2
2,147,476	-				-0.6
2,147,476	-				+0.5
2,147,569	+		PS417_09960	0.17	-0.6
2,147,569	+		PS417_09960	0.17	-1.6
2,147,569	+		PS417_09960	0.17	-2.2
2,147,570	-		PS417_09960	0.17	-0.2
2,147,570	-		PS417_09960	0.17	-0.7
2,147,570	-		PS417_09960	0.17	-0.6
2,147,571	+		PS417_09960	0.18	-0.5
2,147,572	-		PS417_09960	0.18	+0.6
2,147,715	-		PS417_09960	0.62	-1.5
2,147,878	-				+0.7
2,147,954	+				+0.0
2,147,955	-				+0.1
2,147,974	+				-0.0
2,148,101	+		PS417_09965	0.17	+1.4
2,148,101	+		PS417_09965	0.17	+0.1
2,148,101	+		PS417_09965	0.17	+0.2
2,148,101	+		PS417_09965	0.17	-0.8
2,148,102	-		PS417_09965	0.17	+1.3
2,148,110	+		PS417_09965	0.18	+0.1
2,148,110	+		PS417_09965	0.18	-0.4
2,148,110	+				-0.5
2,148,111	-		PS417_09965	0.18	-0.0
2,148,111	-		PS417_09965	0.18	-0.3
2,148,113	-		PS417_09965	0.19	+0.3
2,148,113	-		PS417_09965	0.19	+2.2
2,148,113	-		PS417_09965	0.19	-1.3
2,148,113	-		PS417_09965	0.19	-0.3
2,148,113	-		PS417_09965	0.19	-0.5
2,148,116	+		PS417_09965	0.19	+1.5
2,148,134	+		PS417_09965	0.21	-0.7
2,148,135	-		PS417_09965	0.21	+0.0
2,148,169	-		PS417_09965	0.25	-0.5
2,148,188	-				+0.0
2,148,188	-		PS417_09965	0.27	-0.3
2,148,215	+		PS417_09965	0.30	+0.3
2,148,350	+		PS417_09965	0.45	-0.5
2,148,350	+		PS417_09965	0.45	-0.5
2,148,350	+		PS417_09965	0.45	-0.5
2,148,351	-		PS417_09965	0.45	+0.0
2,148,424	+		PS417_09965	0.53	+0.0
2,148,425	-		PS417_09965	0.53	+0.8
2,148,462	+		PS417_09965	0.57	-0.1
2,148,462	+		PS417_09965	0.57	+1.0
2,148,472	+		PS417_09965	0.58	-0.0
2,148,472	+		PS417_09965	0.58	+0.0
2,148,473	-		PS417_09965	0.58	+0.1
2,148,473	-		PS417_09965	0.58	-0.5
2,148,473	-		PS417_09965	0.58	-0.1
2,148,515	+		PS417_09965	0.63	-1.8
2,148,515	+		PS417_09965	0.63	+0.9
2,148,516	-		PS417_09965	0.63	-1.2
2,148,607	+		PS417_09965	0.73	+1.0
2,148,608	-		PS417_09965	0.73	-0.5
2,148,653	+				+2.0
2,148,654	-		PS417_09965	0.78	-1.5
2,148,654	-		PS417_09965	0.78	-1.3
2,148,731	-		PS417_09965	0.86	+0.0
2,148,752	+		PS417_09965	0.89	+0.1
2,148,753	-		PS417_09965	0.89	+0.4
2,148,753	-		PS417_09965	0.89	+0.1
2,148,799	+				-1.3
2,148,799	+				-1.8