Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07500 and PS417_07505 are separated by 126 nucleotides PS417_07505 and PS417_07510 are separated by 109 nucleotides
PS417_07500: PS417_07500 - hypothetical protein, at 1,647,910 to 1,648,986
_07500
PS417_07505: PS417_07505 - cysteine synthase, at 1,649,113 to 1,650,087
_07505
PS417_07510: PS417_07510 - aspartyl beta-hydroxylase, at 1,650,197 to 1,651,135
_07510
Position (kb)
1649
1650
1651 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1648.168 kb on + strand, within PS417_07500 at 1648.168 kb on + strand, within PS417_07500 at 1648.169 kb on - strand, within PS417_07500 at 1648.169 kb on - strand, within PS417_07500 at 1648.169 kb on - strand, within PS417_07500 at 1648.463 kb on + strand, within PS417_07500 at 1648.464 kb on - strand, within PS417_07500 at 1648.611 kb on + strand, within PS417_07500 at 1648.671 kb on + strand, within PS417_07500 at 1648.889 kb on + strand at 1648.889 kb on + strand at 1648.890 kb on - strand at 1648.890 kb on - strand at 1648.904 kb on + strand at 1649.071 kb on + strand at 1649.102 kb on + strand at 1649.103 kb on - strand at 1649.233 kb on + strand, within PS417_07505 at 1649.374 kb on + strand, within PS417_07505 at 1649.377 kb on - strand, within PS417_07505 at 1649.377 kb on - strand, within PS417_07505 at 1649.530 kb on + strand, within PS417_07505 at 1649.531 kb on - strand, within PS417_07505 at 1649.680 kb on + strand, within PS417_07505 at 1649.680 kb on + strand, within PS417_07505 at 1649.681 kb on - strand, within PS417_07505 at 1649.681 kb on - strand, within PS417_07505 at 1649.681 kb on - strand, within PS417_07505 at 1649.683 kb on - strand, within PS417_07505 at 1649.683 kb on - strand at 1650.002 kb on + strand at 1650.032 kb on - strand at 1650.179 kb on - strand at 1650.257 kb on + strand at 1650.257 kb on + strand at 1650.257 kb on + strand at 1650.257 kb on + strand at 1650.258 kb on - strand at 1650.258 kb on - strand at 1650.377 kb on + strand, within PS417_07510 at 1650.470 kb on + strand, within PS417_07510 at 1650.542 kb on + strand, within PS417_07510 at 1650.543 kb on - strand, within PS417_07510 at 1650.543 kb on - strand, within PS417_07510 at 1650.748 kb on + strand, within PS417_07510 at 1650.771 kb on - strand, within PS417_07510 at 1650.812 kb on + strand at 1650.992 kb on + strand, within PS417_07510 at 1650.992 kb on + strand, within PS417_07510
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,648,168 + PS417_07500 0.24 -0.2 1,648,168 + PS417_07500 0.24 -0.1 1,648,169 - PS417_07500 0.24 +0.1 1,648,169 - PS417_07500 0.24 -0.4 1,648,169 - PS417_07500 0.24 -0.2 1,648,463 + PS417_07500 0.51 +1.8 1,648,464 - PS417_07500 0.51 -0.0 1,648,611 + PS417_07500 0.65 +0.3 1,648,671 + PS417_07500 0.71 +0.6 1,648,889 + -0.5 1,648,889 + +1.1 1,648,890 - +0.2 1,648,890 - +0.2 1,648,904 + -0.6 1,649,071 + +0.1 1,649,102 + +0.7 1,649,103 - +0.3 1,649,233 + PS417_07505 0.12 -1.6 1,649,374 + PS417_07505 0.27 -0.8 1,649,377 - PS417_07505 0.27 +3.1 1,649,377 - PS417_07505 0.27 -0.5 1,649,530 + PS417_07505 0.43 -0.7 1,649,531 - PS417_07505 0.43 -0.5 1,649,680 + PS417_07505 0.58 -1.2 1,649,680 + PS417_07505 0.58 -0.0 1,649,681 - PS417_07505 0.58 +1.7 1,649,681 - PS417_07505 0.58 +0.2 1,649,681 - PS417_07505 0.58 +0.2 1,649,683 - PS417_07505 0.58 -0.6 1,649,683 - +2.7 1,650,002 + -0.1 1,650,032 - -0.3 1,650,179 - -1.3 1,650,257 + +0.5 1,650,257 + -0.3 1,650,257 + -0.2 1,650,257 + -1.7 1,650,258 - -0.5 1,650,258 - -0.6 1,650,377 + PS417_07510 0.19 +0.5 1,650,470 + PS417_07510 0.29 -1.3 1,650,542 + PS417_07510 0.37 +0.7 1,650,543 - PS417_07510 0.37 -0.3 1,650,543 - PS417_07510 0.37 -0.5 1,650,748 + PS417_07510 0.59 +2.1 1,650,771 - PS417_07510 0.61 -0.7 1,650,812 + +0.1 1,650,992 + PS417_07510 0.85 +1.0 1,650,992 + PS417_07510 0.85 +0.6
Or see this region's nucleotide sequence