Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07345 and PS417_07350 are separated by 30 nucleotides PS417_07350 and PS417_07355 are separated by 112 nucleotides PS417_07355 and PS417_07360 overlap by 26 nucleotides
PS417_07345: PS417_07345 - cyanate hydratase, at 1,619,323 to 1,619,793
_07345
PS417_07350: PS417_07350 - carbonic anhydrase, at 1,619,824 to 1,620,456
_07350
PS417_07355: PS417_07355 - transcriptional regulator, at 1,620,569 to 1,621,435
_07355
PS417_07360: PS417_07360 - ArtI protein, at 1,621,410 to 1,622,183
_07360
Position (kb)
1620
1621
1622 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1619.913 kb on - strand, within PS417_07350 at 1619.913 kb on - strand, within PS417_07350 at 1620.510 kb on - strand at 1620.552 kb on + strand at 1620.553 kb on - strand at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1621.010 kb on - strand, within PS417_07355 at 1621.161 kb on - strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.173 kb on - strand, within PS417_07355 at 1621.192 kb on - strand, within PS417_07355 at 1621.448 kb on - strand at 1621.540 kb on + strand, within PS417_07360 at 1621.540 kb on + strand, within PS417_07360 at 1622.020 kb on + strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.221 kb on - strand at 1622.300 kb on - strand at 1622.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,619,913 - PS417_07350 0.14 -1.7 1,619,913 - PS417_07350 0.14 -1.1 1,620,510 - -0.9 1,620,552 + +0.1 1,620,553 - +2.4 1,620,758 + PS417_07355 0.22 +0.9 1,620,758 + PS417_07355 0.22 -0.5 1,620,758 + PS417_07355 0.22 +2.1 1,620,758 + PS417_07355 0.22 +0.6 1,620,758 + PS417_07355 0.22 -0.2 1,620,759 - PS417_07355 0.22 -0.0 1,620,759 - PS417_07355 0.22 -0.4 1,621,010 - PS417_07355 0.51 -0.7 1,621,161 - PS417_07355 0.68 -1.1 1,621,172 + PS417_07355 0.70 +1.2 1,621,172 + PS417_07355 0.70 +0.2 1,621,173 - PS417_07355 0.70 +0.2 1,621,192 - PS417_07355 0.72 +0.9 1,621,448 - -0.2 1,621,540 + PS417_07360 0.17 +1.7 1,621,540 + PS417_07360 0.17 -0.2 1,622,020 + PS417_07360 0.79 +1.2 1,622,021 - PS417_07360 0.79 -1.8 1,622,021 - PS417_07360 0.79 +0.1 1,622,048 - PS417_07360 0.82 -0.8 1,622,048 - PS417_07360 0.82 -0.1 1,622,221 - +1.4 1,622,300 - +1.9 1,622,339 - -0.4
Or see this region's nucleotide sequence