Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21790 and PS417_21795 are separated by 25 nucleotides PS417_21795 and PS417_21800 are separated by 75 nucleotides PS417_21800 and PS417_21805 are separated by 54 nucleotides
PS417_21790: PS417_21790 - arginine ABC transporter ATP-binding protein, at 4,732,219 to 4,732,983
_21790
PS417_21795: PS417_21795 - ABC transporter substrate-binding protein, at 4,733,009 to 4,733,830
_21795
PS417_21800: PS417_21800 - MFS transporter, at 4,733,906 to 4,735,075
_21800
PS417_21805: PS417_21805 - hypothetical protein, at 4,735,130 to 4,736,077
_21805
Position (kb) 4733
4734
4735
4736 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4732.928 kb on + strand at 4732.932 kb on - strand at 4732.932 kb on - strand at 4732.963 kb on - strand at 4732.981 kb on + strand at 4732.982 kb on - strand at 4732.982 kb on - strand at 4732.986 kb on - strand at 4733.220 kb on + strand, within PS417_21795 at 4733.349 kb on - strand, within PS417_21795 at 4733.372 kb on + strand, within PS417_21795 at 4733.373 kb on - strand at 4733.610 kb on - strand, within PS417_21795 at 4733.610 kb on - strand, within PS417_21795 at 4733.637 kb on - strand, within PS417_21795 at 4733.843 kb on - strand at 4733.915 kb on + strand at 4733.915 kb on + strand at 4733.916 kb on - strand at 4734.315 kb on - strand, within PS417_21800 at 4734.328 kb on + strand, within PS417_21800 at 4734.576 kb on - strand at 4734.584 kb on + strand at 4734.585 kb on - strand at 4734.687 kb on - strand, within PS417_21800 at 4734.687 kb on - strand, within PS417_21800 at 4734.841 kb on + strand, within PS417_21800 at 4734.841 kb on + strand, within PS417_21800 at 4734.842 kb on - strand, within PS417_21800 at 4734.842 kb on - strand at 4734.902 kb on + strand, within PS417_21800 at 4734.905 kb on + strand, within PS417_21800 at 4734.962 kb on + strand at 4734.998 kb on + strand at 4734.998 kb on + strand at 4734.998 kb on + strand at 4734.999 kb on - strand at 4734.999 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.182 kb on - strand at 4735.188 kb on + strand at 4735.189 kb on - strand at 4735.189 kb on - strand at 4735.286 kb on - strand, within PS417_21805 at 4735.323 kb on - strand, within PS417_21805 at 4735.323 kb on - strand, within PS417_21805 at 4735.408 kb on - strand, within PS417_21805 at 4735.408 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.833 kb on - strand, within PS417_21805 at 4735.848 kb on - strand, within PS417_21805 at 4735.875 kb on - strand, within PS417_21805 at 4735.937 kb on + strand, within PS417_21805 at 4735.938 kb on - strand, within PS417_21805
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 4,732,928 + -0.6 4,732,932 - -1.4 4,732,932 - -0.1 4,732,963 - -1.2 4,732,981 + +0.7 4,732,982 - -0.4 4,732,982 - -0.2 4,732,986 - +0.9 4,733,220 + PS417_21795 0.26 +0.4 4,733,349 - PS417_21795 0.41 +0.0 4,733,372 + PS417_21795 0.44 -1.0 4,733,373 - -0.6 4,733,610 - PS417_21795 0.73 -0.6 4,733,610 - PS417_21795 0.73 +0.0 4,733,637 - PS417_21795 0.76 +0.9 4,733,843 - -0.6 4,733,915 + -0.3 4,733,915 + +0.9 4,733,916 - +0.8 4,734,315 - PS417_21800 0.35 +0.8 4,734,328 + PS417_21800 0.36 +0.7 4,734,576 - +0.0 4,734,584 + +0.0 4,734,585 - -0.2 4,734,687 - PS417_21800 0.67 +0.7 4,734,687 - PS417_21800 0.67 +0.2 4,734,841 + PS417_21800 0.80 +0.3 4,734,841 + PS417_21800 0.80 +0.6 4,734,842 - PS417_21800 0.80 +1.2 4,734,842 - +1.4 4,734,902 + PS417_21800 0.85 +0.8 4,734,905 + PS417_21800 0.85 +0.8 4,734,962 + +0.4 4,734,998 + +3.0 4,734,998 + +0.1 4,734,998 + +2.0 4,734,999 - -0.0 4,734,999 - -0.9 4,735,099 - +1.0 4,735,099 - +0.0 4,735,099 - +0.8 4,735,099 - +0.3 4,735,182 - +0.5 4,735,188 + +0.7 4,735,189 - -1.1 4,735,189 - +0.2 4,735,286 - PS417_21805 0.16 +0.9 4,735,323 - PS417_21805 0.20 -0.4 4,735,323 - PS417_21805 0.20 +0.4 4,735,408 - PS417_21805 0.29 -0.4 4,735,408 - PS417_21805 0.29 -3.3 4,735,776 - PS417_21805 0.68 +0.9 4,735,776 - PS417_21805 0.68 -1.6 4,735,776 - PS417_21805 0.68 -0.9 4,735,776 - PS417_21805 0.68 -0.0 4,735,833 - PS417_21805 0.74 +1.0 4,735,848 - PS417_21805 0.76 -1.5 4,735,875 - PS417_21805 0.79 +0.1 4,735,937 + PS417_21805 0.85 +0.1 4,735,938 - PS417_21805 0.85 -0.7
Or see this region's nucleotide sequence