Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00485 and PS417_00490 are separated by 1 nucleotides PS417_00490 and PS417_00495 overlap by 4 nucleotides PS417_00495 and PS417_00500 are separated by 54 nucleotides
PS417_00485: PS417_00485 - ABC transporter permease, at 96,047 to 96,985
_00485
PS417_00490: PS417_00490 - iron ABC transporter ATP-binding protein, at 96,987 to 97,790
_00490
PS417_00495: PS417_00495 - ABC transporter permease, at 97,787 to 98,935
_00495
PS417_00500: PS417_00500 - membrane protein, at 98,990 to 100,021
_00500
Position (kb) 97
98
99 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 96.867 kb on + strand, within PS417_00485 at 96.990 kb on + strand at 96.991 kb on - strand at 96.991 kb on - strand at 96.991 kb on - strand at 96.999 kb on + strand at 97.150 kb on + strand, within PS417_00490 at 97.151 kb on - strand, within PS417_00490 at 97.354 kb on + strand, within PS417_00490 at 97.355 kb on - strand, within PS417_00490 at 97.623 kb on - strand, within PS417_00490 at 97.684 kb on + strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.779 kb on + strand at 97.780 kb on - strand at 98.045 kb on + strand, within PS417_00495 at 98.142 kb on - strand, within PS417_00495 at 98.397 kb on - strand, within PS417_00495 at 98.766 kb on - strand, within PS417_00495 at 98.799 kb on + strand, within PS417_00495 at 98.800 kb on - strand, within PS417_00495 at 98.800 kb on - strand, within PS417_00495 at 98.867 kb on - strand at 98.936 kb on - strand at 98.969 kb on + strand at 98.969 kb on + strand at 98.973 kb on + strand at 98.973 kb on + strand at 98.974 kb on - strand at 98.974 kb on - strand at 98.974 kb on - strand at 98.976 kb on + strand at 98.977 kb on - strand at 98.991 kb on + strand at 98.992 kb on - strand at 98.992 kb on - strand at 99.158 kb on - strand, within PS417_00500 at 99.208 kb on - strand, within PS417_00500 at 99.208 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.631 kb on - strand, within PS417_00500 at 99.634 kb on - strand, within PS417_00500
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 96,867 + PS417_00485 0.87 -0.1 96,990 + +0.3 96,991 - -0.4 96,991 - -2.4 96,991 - +0.8 96,999 + +0.9 97,150 + PS417_00490 0.20 +3.1 97,151 - PS417_00490 0.20 +0.0 97,354 + PS417_00490 0.46 -0.4 97,355 - PS417_00490 0.46 +0.5 97,623 - PS417_00490 0.79 -1.8 97,684 + PS417_00490 0.87 -0.2 97,685 - PS417_00490 0.87 -1.1 97,685 - PS417_00490 0.87 +1.3 97,685 - PS417_00490 0.87 -1.1 97,685 - PS417_00490 0.87 -1.6 97,779 + -2.3 97,780 - -0.5 98,045 + PS417_00495 0.22 -4.2 98,142 - PS417_00495 0.31 +0.0 98,397 - PS417_00495 0.53 -1.6 98,766 - PS417_00495 0.85 -1.5 98,799 + PS417_00495 0.88 -0.8 98,800 - PS417_00495 0.88 +1.3 98,800 - PS417_00495 0.88 -1.1 98,867 - -1.8 98,936 - -0.7 98,969 + -0.8 98,969 + -0.4 98,973 + -1.3 98,973 + +0.0 98,974 - -0.4 98,974 - +2.3 98,974 - -1.4 98,976 + +2.3 98,977 - +0.0 98,991 + +0.1 98,992 - -0.5 98,992 - -0.4 99,158 - PS417_00500 0.16 -0.7 99,208 - PS417_00500 0.21 -0.3 99,208 - PS417_00500 0.21 +0.3 99,517 - PS417_00500 0.51 -0.5 99,517 - PS417_00500 0.51 -0.3 99,517 - PS417_00500 0.51 -0.4 99,631 - PS417_00500 0.62 -0.2 99,634 - PS417_00500 0.62 +1.1
Or see this region's nucleotide sequence