Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03410 and PS417_03415 are separated by 54 nucleotides PS417_03415 and PS417_03420 are separated by 180 nucleotides
PS417_03410: PS417_03410 - gamma-glutamyltransferase, at 781,819 to 783,630
_03410
PS417_03415: PS417_03415 - isomerase, at 783,685 to 784,464
_03415
PS417_03420: PS417_03420 - hypothetical protein, at 784,645 to 788,943
_03420
Position (kb) 783
784
785 Strain fitness (log2 ratio) -2
-1
0
1
2 at 782.817 kb on - strand, within PS417_03410 at 782.817 kb on - strand, within PS417_03410 at 782.904 kb on - strand, within PS417_03410 at 783.011 kb on + strand, within PS417_03410 at 783.480 kb on + strand at 783.710 kb on + strand at 783.711 kb on - strand at 783.846 kb on + strand, within PS417_03415 at 783.847 kb on - strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.320 kb on - strand, within PS417_03415 at 784.452 kb on + strand at 784.481 kb on - strand at 784.481 kb on - strand at 784.499 kb on + strand at 784.500 kb on - strand at 784.500 kb on - strand at 784.608 kb on + strand at 784.608 kb on + strand at 784.609 kb on - strand at 784.638 kb on + strand at 784.744 kb on + strand at 784.867 kb on + strand at 784.868 kb on - strand at 784.868 kb on - strand at 784.902 kb on + strand at 784.903 kb on - strand at 785.239 kb on - strand, within PS417_03420
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 782,817 - PS417_03410 0.55 -1.6 782,817 - PS417_03410 0.55 +0.4 782,904 - PS417_03410 0.60 -0.6 783,011 + PS417_03410 0.66 -0.6 783,480 + -1.3 783,710 + -1.5 783,711 - -1.1 783,846 + PS417_03415 0.21 -0.1 783,847 - PS417_03415 0.21 -2.1 784,028 + PS417_03415 0.44 -0.4 784,028 + PS417_03415 0.44 +2.2 784,028 + PS417_03415 0.44 +0.7 784,320 - PS417_03415 0.81 -1.3 784,452 + -0.1 784,481 - +1.3 784,481 - -0.0 784,499 + -2.1 784,500 - +0.2 784,500 - -0.4 784,608 + -0.8 784,608 + -0.8 784,609 - -1.9 784,638 + -1.8 784,744 + +0.6 784,867 + -2.0 784,868 - -0.3 784,868 - -0.2 784,902 + -2.6 784,903 - -0.4 785,239 - PS417_03420 0.14 -0.1
Or see this region's nucleotide sequence