Strain Fitness in Pseudomonas simiae WCS417 around PS417_00305

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
59,439	+		PS417_00300	0.30	-0.3
59,439	+		PS417_00300	0.30	+0.2
59,440	-		PS417_00300	0.30	-0.3
59,499	+		PS417_00300	0.35	-1.0
59,505	+		PS417_00300	0.35	-0.0
59,505	+		PS417_00300	0.35	-1.7
59,505	+		PS417_00300	0.35	-1.2
59,589	+		PS417_00300	0.43	-1.7
59,589	+		PS417_00300	0.43	-1.8
59,590	-		PS417_00300	0.43	-0.5
59,590	-		PS417_00300	0.43	-2.6
59,764	-		PS417_00300	0.58	+2.1
59,764	-		PS417_00300	0.58	-1.7
59,764	-		PS417_00300	0.58	-1.5
59,764	-		PS417_00300	0.58	-0.1
59,904	-		PS417_00300	0.71	+0.3
59,949	+		PS417_00300	0.75	-0.6
59,949	+		PS417_00300	0.75	+0.3
59,950	-		PS417_00300	0.75	+0.2
60,147	+				+0.3
60,147	+				-0.8
60,194	+				-1.3
60,236	+				+2.1
60,237	-				-0.7
60,400	+				-0.5
60,730	+		PS417_00305	0.28	-0.5
60,731	-		PS417_00305	0.28	-1.1
60,731	-		PS417_00305	0.28	-1.4
60,751	+		PS417_00305	0.29	-0.3
60,751	+		PS417_00305	0.29	+0.7
60,752	-		PS417_00305	0.29	-1.1
60,752	-		PS417_00305	0.29	-1.5
61,069	+		PS417_00305	0.49	-3.0
61,069	+		PS417_00305	0.49	-0.6
61,069	+		PS417_00305	0.49	-3.6
61,070	-		PS417_00305	0.49	-1.8
61,070	-		PS417_00305	0.49	-0.4
61,070	-		PS417_00305	0.49	-1.5
61,255	+		PS417_00305	0.61	+0.2
61,255	+		PS417_00305	0.61	-1.1
61,255	+		PS417_00305	0.61	-0.9
61,255	+				+0.7
61,256	-		PS417_00305	0.61	+0.0
61,256	-		PS417_00305	0.61	-0.8
61,447	+		PS417_00305	0.73	-0.8
61,448	-		PS417_00305	0.73	-1.8
61,471	+		PS417_00305	0.74	+1.0
61,472	-		PS417_00305	0.74	-1.2
61,475	+		PS417_00305	0.75	-0.6
61,475	+		PS417_00305	0.75	-0.7
61,517	-		PS417_00305	0.77	-0.4
61,519	+		PS417_00305	0.77	+2.3
61,520	-		PS417_00305	0.77	-0.2
61,549	+		PS417_00305	0.79	+0.7
61,550	-		PS417_00305	0.79	-0.1
61,663	+		PS417_00305	0.86	-0.1
61,994	-		PS417_00310	0.17	-2.3
61,994	-		PS417_00310	0.17	-2.6
62,151	-		PS417_00310	0.45	-0.6
62,238	+		PS417_00310	0.61	+0.3
62,239	-		PS417_00310	0.61	+0.6
62,239	-		PS417_00310	0.61	+0.7
62,264	-		PS417_00310	0.66	-1.4
62,264	-		PS417_00310	0.66	-0.5
62,264	-		PS417_00310	0.66	-0.3
62,344	-		PS417_00310	0.80	-0.3
62,449	+				-1.6
62,453	+				+0.2
62,505	+				+2.3
62,505	+				-1.2
62,505	+				+0.1
62,506	-				-0.6
62,508	+				-2.3
62,537	-				-1.6
62,537	-				-1.1
62,537	-				-1.0
62,661	+		PS417_00315	0.20	-0.3
62,816	-		PS417_00315	0.37	+0.0