Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28115 and PS417_28120 are separated by 11 nucleotides PS417_28120 and PS417_28125 are separated by 333 nucleotides PS417_28125 and PS417_28130 are separated by 182 nucleotides
PS417_28115: PS417_28115 - phosphoribosylaminoimidazole carboxylase, at 6,066,820 to 6,067,905
_28115
PS417_28120: PS417_28120 - N5-carboxyaminoimidazole ribonucleotide mutase, at 6,067,917 to 6,068,408
_28120
PS417_28125: PS417_28125 - LysR family transcriptional regulator, at 6,068,742 to 6,069,650
_28125
PS417_28130: PS417_28130 - aspartate ammonia-lyase, at 6,069,833 to 6,071,257
_28130
Position (kb)
6068
6069
6070 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 6068.497 kb on - strand at 6068.530 kb on - strand at 6068.537 kb on - strand at 6068.539 kb on + strand at 6068.539 kb on + strand at 6068.539 kb on + strand at 6068.540 kb on - strand at 6068.548 kb on + strand at 6068.549 kb on - strand at 6068.599 kb on - strand at 6068.645 kb on - strand at 6068.693 kb on - strand at 6070.226 kb on + strand, within PS417_28130
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 6,068,497 - -0.8 6,068,530 - -3.7 6,068,537 - -1.4 6,068,539 + -1.6 6,068,539 + -2.2 6,068,539 + +0.7 6,068,540 - -0.5 6,068,548 + -3.5 6,068,549 - +0.2 6,068,599 - +1.3 6,068,645 - -0.0 6,068,693 - -0.7 6,070,226 + PS417_28130 0.28 +0.3
Or see this region's nucleotide sequence