Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26130 and PS417_26135 are separated by 51 nucleotides PS417_26135 and PS417_26140 overlap by 1 nucleotides PS417_26140 and PS417_26145 are separated by 9 nucleotides
PS417_26130: PS417_26130 - membrane protein, at 5,646,694 to 5,648,067
_26130
PS417_26135: PS417_26135 - histidine kinase, at 5,648,119 to 5,649,558
_26135
PS417_26140: PS417_26140 - transcriptional regulator, at 5,649,558 to 5,650,226
_26140
PS417_26145: PS417_26145 - hypothetical protein, at 5,650,236 to 5,650,736
_26145
Position (kb) 5648
5649
5650 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5647.142 kb on + strand, within PS417_26130 at 5647.142 kb on + strand, within PS417_26130 at 5647.142 kb on + strand, within PS417_26130 at 5647.142 kb on + strand, within PS417_26130 at 5647.143 kb on - strand, within PS417_26130 at 5647.169 kb on + strand, within PS417_26130 at 5647.319 kb on - strand, within PS417_26130 at 5647.384 kb on + strand, within PS417_26130 at 5647.731 kb on - strand, within PS417_26130 at 5647.797 kb on - strand, within PS417_26130 at 5647.919 kb on + strand, within PS417_26130 at 5647.919 kb on + strand, within PS417_26130 at 5648.347 kb on + strand, within PS417_26135 at 5648.347 kb on + strand, within PS417_26135 at 5648.347 kb on + strand, within PS417_26135 at 5648.348 kb on - strand, within PS417_26135 at 5648.468 kb on + strand, within PS417_26135 at 5648.469 kb on - strand, within PS417_26135 at 5648.545 kb on + strand, within PS417_26135 at 5648.707 kb on - strand, within PS417_26135 at 5648.779 kb on + strand, within PS417_26135 at 5648.780 kb on - strand, within PS417_26135 at 5648.780 kb on - strand, within PS417_26135 at 5648.780 kb on - strand, within PS417_26135 at 5648.783 kb on + strand, within PS417_26135 at 5648.784 kb on - strand, within PS417_26135 at 5648.784 kb on - strand, within PS417_26135 at 5648.796 kb on - strand, within PS417_26135 at 5649.032 kb on + strand, within PS417_26135 at 5649.033 kb on - strand, within PS417_26135 at 5649.272 kb on + strand, within PS417_26135 at 5649.272 kb on + strand, within PS417_26135 at 5649.397 kb on - strand, within PS417_26135 at 5649.431 kb on - strand at 5649.431 kb on - strand at 5649.527 kb on + strand at 5649.528 kb on - strand at 5649.528 kb on - strand at 5649.577 kb on + strand at 5649.578 kb on - strand at 5649.578 kb on - strand at 5649.934 kb on + strand, within PS417_26140 at 5649.934 kb on + strand, within PS417_26140 at 5649.934 kb on + strand, within PS417_26140 at 5649.934 kb on + strand, within PS417_26140 at 5649.935 kb on - strand, within PS417_26140 at 5649.935 kb on - strand, within PS417_26140 at 5650.217 kb on + strand at 5650.261 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 5,647,142 + PS417_26130 0.33 -0.2 5,647,142 + PS417_26130 0.33 +0.0 5,647,142 + PS417_26130 0.33 -0.9 5,647,142 + PS417_26130 0.33 +1.6 5,647,143 - PS417_26130 0.33 -1.2 5,647,169 + PS417_26130 0.35 -2.3 5,647,319 - PS417_26130 0.45 +0.2 5,647,384 + PS417_26130 0.50 +1.6 5,647,731 - PS417_26130 0.75 -1.6 5,647,797 - PS417_26130 0.80 -0.6 5,647,919 + PS417_26130 0.89 +0.8 5,647,919 + PS417_26130 0.89 -0.1 5,648,347 + PS417_26135 0.16 -2.0 5,648,347 + PS417_26135 0.16 -0.2 5,648,347 + PS417_26135 0.16 -1.1 5,648,348 - PS417_26135 0.16 +1.5 5,648,468 + PS417_26135 0.24 +0.5 5,648,469 - PS417_26135 0.24 -2.5 5,648,545 + PS417_26135 0.30 -0.2 5,648,707 - PS417_26135 0.41 +0.4 5,648,779 + PS417_26135 0.46 +0.7 5,648,780 - PS417_26135 0.46 -1.5 5,648,780 - PS417_26135 0.46 +1.4 5,648,780 - PS417_26135 0.46 -0.0 5,648,783 + PS417_26135 0.46 -0.2 5,648,784 - PS417_26135 0.46 -0.2 5,648,784 - PS417_26135 0.46 -0.1 5,648,796 - PS417_26135 0.47 +1.1 5,649,032 + PS417_26135 0.63 -0.3 5,649,033 - PS417_26135 0.63 +1.4 5,649,272 + PS417_26135 0.80 -0.6 5,649,272 + PS417_26135 0.80 -0.1 5,649,397 - PS417_26135 0.89 +0.5 5,649,431 - -0.6 5,649,431 - -1.1 5,649,527 + -2.0 5,649,528 - +0.5 5,649,528 - -0.4 5,649,577 + +1.2 5,649,578 - -0.8 5,649,578 - -1.1 5,649,934 + PS417_26140 0.56 +0.2 5,649,934 + PS417_26140 0.56 +0.1 5,649,934 + PS417_26140 0.56 +0.7 5,649,934 + PS417_26140 0.56 -0.2 5,649,935 - PS417_26140 0.56 +0.5 5,649,935 - PS417_26140 0.56 -0.4 5,650,217 + +2.4 5,650,261 + -0.7
Or see this region's nucleotide sequence