Strain Fitness in Pseudomonas simiae WCS417 around PS417_25830

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
5,575,934	+				-1.7
5,575,935	-				-0.4
5,575,965	-				+2.3
5,575,989	+				-0.9
5,576,018	+				+0.2
5,576,018	+				+1.4
5,576,091	+		PS417_25825	0.27	-0.5
5,576,193	+		PS417_25825	0.58	-1.7
5,576,256	+		PS417_25825	0.77	-0.8
5,576,257	-		PS417_25825	0.78	-0.8
5,576,257	-		PS417_25825	0.78	+1.3
5,576,257	-		PS417_25825	0.78	+1.6
5,576,402	+				-0.4
5,576,403	-				-0.5
5,576,440	+				-1.5
5,576,441	-				-1.0
5,576,441	-				-0.5
5,576,593	+				+0.7
5,576,620	+				-1.3
5,576,718	-				-1.2
5,576,718	-				-0.8
5,576,934	-		PS417_25830	0.17	-2.8
5,577,012	-		PS417_25830	0.21	-0.4
5,577,335	+		PS417_25830	0.37	+0.7
5,577,406	+		PS417_25830	0.41	-1.6
5,577,406	+		PS417_25830	0.41	+0.3
5,577,407	-		PS417_25830	0.41	-1.0
5,577,407	-		PS417_25830	0.41	-0.9
5,577,452	+		PS417_25830	0.44	-1.2
5,577,452	+		PS417_25830	0.44	-0.9
5,577,452	+		PS417_25830	0.44	-1.4
5,577,453	-		PS417_25830	0.44	-1.6
5,577,453	-		PS417_25830	0.44	+0.9
5,577,575	+		PS417_25830	0.50	-0.4
5,577,575	+		PS417_25830	0.50	-0.5
5,577,576	-		PS417_25830	0.50	+1.3
5,577,576	-		PS417_25830	0.50	-1.6
5,577,593	+		PS417_25830	0.51	-0.3
5,577,746	+		PS417_25830	0.59	+0.2
5,577,747	-		PS417_25830	0.59	-0.3
5,577,764	+		PS417_25830	0.60	+2.3
5,577,945	-		PS417_25830	0.69	-2.2
5,577,945	-		PS417_25830	0.69	-0.3
5,577,945	-		PS417_25830	0.69	-1.4
5,578,022	+		PS417_25830	0.73	-1.6
5,578,022	+		PS417_25830	0.73	-0.1
5,578,022	+		PS417_25830	0.73	-2.2
5,578,023	-		PS417_25830	0.73	-0.5
5,578,085	+		PS417_25830	0.76	-0.3
5,578,095	-		PS417_25830	0.77	+1.3
5,578,119	-		PS417_25830	0.78	-2.1
5,578,127	+		PS417_25830	0.79	+0.4
5,578,128	-		PS417_25830	0.79	+0.5
5,578,128	-		PS417_25830	0.79	-1.7
5,578,492	-				-0.2
5,578,511	+				-1.1
5,578,511	+				-2.6
5,578,511	+				-3.0
5,578,511	+				-1.3
5,578,525	+				-2.1
5,578,535	+				+0.7
5,578,595	-				-1.2
5,578,623	+				-0.2
5,578,624	-				-0.7
5,578,657	+				-2.2
5,578,657	+				+0.7
5,578,657	+				+0.3
5,578,658	-				-1.1
5,578,658	-				-1.6
5,578,911	+		PS417_25835	0.20	-0.6
5,578,991	+		PS417_25835	0.27	-2.7
5,579,065	-		PS417_25835	0.33	-1.7
5,579,175	+		PS417_25835	0.41	-1.4
5,579,176	-		PS417_25835	0.41	+0.7
5,579,176	-		PS417_25835	0.41	-1.3
5,579,176	-		PS417_25835	0.41	+0.3
5,579,176	-		PS417_25835	0.41	+0.8
5,579,351	-		PS417_25835	0.55	-2.2
5,579,351	-		PS417_25835	0.55	-1.2
5,579,494	+		PS417_25835	0.66	-0.6
5,579,494	+		PS417_25835	0.66	-0.9
5,579,495	-		PS417_25835	0.66	+3.9