Strain Fitness in Pseudomonas simiae WCS417 around PS417_24110

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
5,219,020	+		PS417_24105	0.57	+2.5
5,219,030	+		PS417_24105	0.58	-1.7
5,219,031	-		PS417_24105	0.58	+0.5
5,219,082	+		PS417_24105	0.61	-1.0
5,219,082	+		PS417_24105	0.61	+0.4
5,219,082	+		PS417_24105	0.61	-1.3
5,219,083	-		PS417_24105	0.61	+0.2
5,219,083	-		PS417_24105	0.61	+1.8
5,219,083	-		PS417_24105	0.61	+0.2
5,219,083	-		PS417_24105	0.61	+1.2
5,219,274	-		PS417_24105	0.72	-1.9
5,219,274	-		PS417_24105	0.72	-0.3
5,219,274	-		PS417_24105	0.72	-0.1
5,219,282	-		PS417_24105	0.73	-0.7
5,219,296	-		PS417_24105	0.73	-0.4
5,219,296	-		PS417_24105	0.73	+0.6
5,219,358	+		PS417_24105	0.77	+2.3
5,219,359	-		PS417_24105	0.77	-0.6
5,219,657	+				-0.7
5,219,658	-				+2.0
5,219,746	-				-0.7
5,219,746	-				+0.6
5,219,758	+				+1.0
5,219,758	+				+0.6
5,219,759	-				-0.2
5,219,759	-				-0.3
5,219,759	-				-2.9
5,219,759	-				-1.3
5,219,759	-				+2.0
5,219,761	+				+1.0
5,219,766	+				-0.9
5,219,801	+				+0.5
5,219,801	+				+0.6
5,219,802	-				+0.9
5,220,011	-				+3.3
5,220,011	-				-0.6
5,220,468	+		PS417_24110	0.23	+0.0
5,220,594	+		PS417_24110	0.28	-3.1
5,220,594	+		PS417_24110	0.28	+0.3
5,220,607	+		PS417_24110	0.28	+0.9
5,220,607	+		PS417_24110	0.28	+0.5
5,220,608	-		PS417_24110	0.28	-1.0
5,220,608	-		PS417_24110	0.28	-1.8
5,221,170	+		PS417_24110	0.48	+1.0
5,221,430	+		PS417_24110	0.57	+0.8
5,221,431	-		PS417_24110	0.57	-1.2
5,221,573	-		PS417_24110	0.62	-0.1
5,221,573	-		PS417_24110	0.62	-0.3
5,221,667	-		PS417_24110	0.66	+2.3
5,221,929	+		PS417_24110	0.75	+1.3
5,221,929	+		PS417_24110	0.75	-0.5
5,221,929	+		PS417_24110	0.75	-0.8
5,222,098	-		PS417_24110	0.81	-0.7
5,222,118	-		PS417_24110	0.82	-0.7
5,222,236	+		PS417_24110	0.86	+0.8
5,222,236	+		PS417_24110	0.86	+1.3
5,222,236	+		PS417_24110	0.86	-0.3
5,222,245	-		PS417_24110	0.86	-1.5
5,222,519	+				+0.1
5,222,519	+				-0.3
5,222,590	-				+0.3
5,222,590	-				+1.7
5,222,689	+				-0.9
5,222,689	+				-1.5
5,222,690	-				+1.6
5,222,774	-				-1.6
5,222,774	-				-0.3
5,222,778	+				-0.8
5,222,779	-				-0.5
5,222,779	-				-1.4
5,222,779	-				-1.0
5,222,896	-		PS417_24115	0.42	-1.0
5,222,939	+		PS417_24115	0.57	-2.5
5,223,570	-				-0.3
5,223,570	-				-2.9
5,223,570	-				-1.4
5,223,602	+				+0.4