Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23070 and PS417_23075 are separated by 80 nucleotides PS417_23075 and PS417_23080 are separated by 152 nucleotides PS417_23080 and PS417_23085 are separated by 137 nucleotides
PS417_23070: PS417_23070 - GMP synthase, at 5,000,503 to 5,002,080
_23070
PS417_23075: PS417_23075 - inosine-5-monophosphate dehydrogenase, at 5,002,161 to 5,003,630
_23075
PS417_23080: PS417_23080 - sugar ABC transporter ATPase, at 5,003,783 to 5,004,331
_23080
PS417_23085: PS417_23085 - permease, at 5,004,469 to 5,005,236
_23085
Position (kb)
5002
5003
5004 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5003.674 kb on - strand at 5003.728 kb on - strand at 5003.728 kb on - strand at 5003.773 kb on + strand at 5003.773 kb on + strand at 5003.774 kb on - strand at 5003.774 kb on - strand at 5003.774 kb on - strand at 5003.774 kb on - strand at 5003.827 kb on - strand at 5003.827 kb on - strand at 5004.096 kb on + strand, within PS417_23080 at 5004.096 kb on + strand, within PS417_23080 at 5004.096 kb on + strand, within PS417_23080 at 5004.096 kb on + strand at 5004.097 kb on - strand, within PS417_23080 at 5004.184 kb on - strand, within PS417_23080 at 5004.449 kb on + strand at 5004.482 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 5,003,674 - +0.3 5,003,728 - +0.8 5,003,728 - -1.9 5,003,773 + -1.6 5,003,773 + +1.3 5,003,774 - -1.6 5,003,774 - -0.2 5,003,774 - +0.8 5,003,774 - +1.8 5,003,827 - -1.2 5,003,827 - +0.2 5,004,096 + PS417_23080 0.57 +1.8 5,004,096 + PS417_23080 0.57 +2.1 5,004,096 + PS417_23080 0.57 -1.7 5,004,096 + +2.8 5,004,097 - PS417_23080 0.57 +0.0 5,004,184 - PS417_23080 0.73 -0.5 5,004,449 + -0.4 5,004,482 + +0.3
Or see this region's nucleotide sequence