Strain Fitness in Pseudomonas simiae WCS417 around PS417_21105

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,592,633	+				+2.3
4,592,633	+				-0.3
4,592,748	-		PS417_21100	0.20	+0.7
4,593,014	+		PS417_21100	0.47	-0.6
4,593,015	-		PS417_21100	0.48	-2.5
4,593,015	-		PS417_21100	0.48	+1.3
4,593,015	-		PS417_21100	0.48	+1.7
4,593,278	+		PS417_21100	0.74	+0.3
4,593,278	+		PS417_21100	0.74	-2.5
4,593,278	+		PS417_21100	0.74	-2.5
4,593,279	-		PS417_21100	0.74	+0.3
4,593,299	+		PS417_21100	0.76	-0.3
4,593,299	+		PS417_21100	0.76	-0.7
4,593,300	-		PS417_21100	0.76	-0.4
4,593,423	+		PS417_21100	0.89	-1.5
4,593,423	+		PS417_21100	0.89	-0.5
4,593,423	+		PS417_21100	0.89	-0.3
4,593,512	-				-2.4
4,593,523	-				+0.1
4,593,569	+				+0.0
4,593,569	+				-0.2
4,593,582	+				-0.5
4,593,592	+				-0.4
4,593,593	-				+2.3
4,593,593	-				-0.1
4,593,593	-				+1.1
4,593,615	+				+1.0
4,593,616	-				-0.0
4,593,648	+				+0.7
4,593,649	-				+0.3
4,593,651	-				-0.3
4,593,652	+				+0.2
4,593,652	+				+0.2
4,593,652	+				+0.4
4,593,652	+				-2.2
4,593,652	+				+1.0
4,593,652	+				-0.7
4,593,652	+				+0.3
4,593,652	+				+1.3
4,593,653	-				-1.3
4,593,653	-				-0.3
4,593,653	-				+0.3
4,593,653	-				+1.3
4,593,653	-				+0.7
4,593,768	+		PS417_21105	0.10	+0.4
4,593,768	+		PS417_21105	0.10	+2.3
4,593,768	+		PS417_21105	0.10	+0.4
4,593,769	-		PS417_21105	0.10	-0.7
4,593,769	-		PS417_21105	0.10	+1.5
4,593,769	-		PS417_21105	0.10	-2.0
4,593,917	+		PS417_21105	0.21	-0.7
4,593,926	+		PS417_21105	0.22	-1.8
4,593,927	-		PS417_21105	0.22	-2.8
4,594,008	-		PS417_21105	0.28	-0.8
4,594,008	-		PS417_21105	0.28	-0.3
4,594,148	-		PS417_21105	0.38	-1.0
4,594,214	+		PS417_21105	0.43	+0.3
4,594,215	-		PS417_21105	0.43	+0.1
4,594,215	-		PS417_21105	0.43	+1.3
4,594,778	+		PS417_21105	0.85	-0.9
4,594,796	+		PS417_21105	0.87	+1.9
4,594,866	+				+2.9
4,594,867	-				-0.4
4,594,867	-				-1.0
4,594,954	-				-0.6
4,595,044	-				-1.7
4,595,128	-				+2.5
4,595,128	-				-0.4
4,595,133	+				+2.3
4,595,213	-				+2.1
4,595,237	-		PS417_21110	0.11	+0.7
4,595,237	-		PS417_21110	0.11	-1.5
4,595,259	+		PS417_21110	0.18	+2.5
4,595,292	+		PS417_21110	0.29	-1.5
4,595,348	+		PS417_21110	0.47	+0.0
4,595,361	-		PS417_21110	0.51	-0.3
4,595,452	+		PS417_21110	0.82	-0.4
4,595,452	+		PS417_21110	0.82	+0.2
4,595,452	+		PS417_21110	0.82	-0.9
4,595,453	-				+1.3
4,595,453	-		PS417_21110	0.82	-1.3
4,595,479	-				-0.8
4,595,521	+				+0.7
4,595,521	+				+0.3
4,595,523	+				-2.1
4,595,831	-				-0.7
4,595,831	-				-0.7
4,595,837	+				+4.3
4,595,838	-				-0.7
4,595,867	+				+0.9
4,595,868	-				+0.5
4,595,878	+				-0.4