Strain Fitness in Pseudomonas simiae WCS417 around PS417_20490

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,449,764	+		PS417_20485	0.45	+1.3
4,449,917	-		PS417_20485	0.78	+1.0
4,450,007	-				+0.3
4,450,041	+				+2.0
4,450,042	-				-0.2
4,450,072	+				-0.3
4,450,072	+				-1.3
4,450,072	+				-0.1
4,450,072	+				+0.0
4,450,072	+				-0.2
4,450,072	+				-0.9
4,450,073	-				-2.9
4,450,073	-				-0.8
4,450,086	+				-0.5
4,450,258	-				+0.2
4,450,258	-				-0.3
4,450,269	+				+0.7
4,450,269	+				-1.9
4,450,269	+				+1.1
4,450,270	-				+0.5
4,450,274	+				+4.6
4,450,317	+				+1.5
4,450,317	+				-1.5
4,450,317	+				-1.4
4,450,317	+				+2.3
4,450,317	+				-2.8
4,450,334	+				-2.9
4,450,335	-				-1.1
4,450,335	-				+0.5
4,450,338	+				-0.0
4,450,338	+				-0.5
4,450,339	-				-1.4
4,450,403	+				+0.0
4,450,403	+				+0.2
4,450,404	-				-0.7
4,450,404	-				-2.1
4,450,446	+				-0.1
4,450,464	+				-0.9
4,450,465	-				+1.3
4,450,465	-				+1.3
4,450,590	+				-0.9
4,450,594	+				+2.7
4,450,594	+				-0.7
4,450,595	-				-1.5
4,450,672	+				-0.1
4,450,672	+				-0.2
4,450,673	-				-1.2
4,450,673	-				-0.9
4,450,686	-				-1.7
4,450,686	-				+0.7
4,450,686	-				+0.3
4,450,697	+				-0.3
4,450,697	+				+0.7
4,450,697	+				-0.4
4,450,697	+				-1.2
4,450,698	-				-1.5
4,450,698	-				-0.1
4,450,698	-				-0.5
4,450,778	+				-1.5
4,450,778	+				-0.9
4,450,779	-				-0.1
4,450,779	-				-0.1
4,450,779	-				+0.5
4,450,821	+				-0.3
4,450,821	+				-2.9
4,450,822	-				-1.1
4,450,822	-				-0.8
4,450,822	-				+0.0
4,450,822	-				-0.4
4,450,837	+				+2.3
4,450,978	+		PS417_20490	0.18	+0.1
4,450,979	-		PS417_20490	0.18	-0.3
4,450,979	-				+0.7
4,451,076	+		PS417_20490	0.25	-0.9
4,451,076	+		PS417_20490	0.25	-3.2
4,451,076	+		PS417_20490	0.25	+3.0
4,451,076	+		PS417_20490	0.25	-1.2
4,451,076	+		PS417_20490	0.25	-2.6
4,451,077	-		PS417_20490	0.25	-0.1
4,451,328	+		PS417_20490	0.45	-1.4
4,451,328	+		PS417_20490	0.45	-0.5
4,451,328	+		PS417_20490	0.45	-1.4
4,451,329	-		PS417_20490	0.45	+0.0
4,451,329	-		PS417_20490	0.45	-0.1
4,451,443	+		PS417_20490	0.54	+1.0
4,451,443	+		PS417_20490	0.54	-0.2
4,451,460	+		PS417_20490	0.56	-1.3
4,451,664	+		PS417_20490	0.72	-1.2
4,451,665	-		PS417_20490	0.72	-1.5
4,451,682	+		PS417_20490	0.73	-1.1
4,451,682	+		PS417_20490	0.73	+0.8
4,451,682	+		PS417_20490	0.73	-1.6
4,451,683	-		PS417_20490	0.73	-0.7
4,451,683	-		PS417_20490	0.73	-2.5
4,451,683	-		PS417_20490	0.73	-0.4
4,451,683	-		PS417_20490	0.73	-0.2
4,451,683	-		PS417_20490	0.73	+0.3
4,451,808	+		PS417_20490	0.83	-0.3
4,451,811	+				-0.5
4,451,811	+		PS417_20490	0.84	-0.4
4,451,811	+		PS417_20490	0.84	-2.1
4,451,812	-		PS417_20490	0.84	+0.7
4,451,830	-		PS417_20490	0.85	-0.2
4,451,830	-		PS417_20490	0.85	-1.1
4,451,858	+		PS417_20490	0.87	-1.1
4,451,859	-		PS417_20490	0.87	-1.0
4,451,859	-		PS417_20490	0.87	-0.1
4,451,859	-		PS417_20490	0.87	-0.1
4,451,926	+				-0.2
4,451,927	-				-0.7
4,451,950	-				+0.9
4,451,971	-				-0.3
4,451,971	-				+0.6
4,451,971	-				-0.1
4,451,971	-				-0.7
4,452,018	+				+0.8
4,452,019	-				-0.7
4,452,121	+				-2.1
4,452,121	+				-1.1
4,452,144	+				+0.7
4,452,186	-				-0.1
4,452,428	+		PS417_20495	0.60	-0.9
4,452,553	-				-0.2
4,452,598	-		PS417_20500	0.10	-0.9
4,452,601	+		PS417_20500	0.11	+0.1
4,452,686	+		PS417_20500	0.30	-0.2
4,452,687	-		PS417_20500	0.30	+1.9
4,452,698	+		PS417_20500	0.33	-1.5
4,452,800	-		PS417_20500	0.55	-1.5
4,452,820	-		PS417_20500	0.60	-0.4
4,452,891	+		PS417_20500	0.76	+2.0
4,452,891	+		PS417_20500	0.76	-0.7
4,452,892	-		PS417_20500	0.76	-1.3
4,452,922	+		PS417_20500	0.82	-1.1
4,452,923	-		PS417_20500	0.83	+1.1
4,452,934	-		PS417_20500	0.85	+0.1