Strain Fitness in Pseudomonas simiae WCS417 around PS417_20455

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,440,505	+				+0.3
4,440,505	+				-1.5
4,440,507	+				-0.1
4,440,507	+				-0.3
4,440,508	-				-2.1
4,440,512	+				+4.6
4,440,527	+				-0.6
4,440,631	-		PS417_20450	0.21	-0.4
4,440,631	-		PS417_20450	0.21	+0.7
4,440,633	+		PS417_20450	0.21	+1.3
4,440,633	+		PS417_20450	0.21	-2.7
4,440,634	-		PS417_20450	0.21	+0.3
4,440,634	-				+3.3
4,440,778	-				+0.3
4,440,778	-		PS417_20450	0.37	+0.6
4,440,778	-		PS417_20450	0.37	-1.0
4,440,880	+		PS417_20450	0.47	+1.3
4,440,881	-		PS417_20450	0.48	-0.8
4,440,971	+		PS417_20450	0.57	+0.3
4,440,971	+		PS417_20450	0.57	-0.9
4,440,972	-		PS417_20450	0.57	+0.2
4,441,014	+		PS417_20450	0.62	+1.0
4,441,014	+		PS417_20450	0.62	-0.5
4,441,014	+		PS417_20450	0.62	-0.5
4,441,014	+		PS417_20450	0.62	-0.9
4,441,109	+		PS417_20450	0.72	-0.1
4,441,110	-		PS417_20450	0.72	-1.5
4,441,137	+		PS417_20450	0.75	-1.6
4,441,137	+		PS417_20450	0.75	-0.4
4,441,138	-		PS417_20450	0.75	-2.2
4,441,138	-		PS417_20450	0.75	+0.5
4,441,138	-		PS417_20450	0.75	-0.4
4,441,141	+		PS417_20450	0.75	+0.8
4,441,142	-		PS417_20450	0.76	-1.5
4,441,151	+		PS417_20450	0.77	+1.9
4,441,200	+		PS417_20450	0.82	+3.8
4,441,200	+		PS417_20450	0.82	-0.3
4,441,200	+		PS417_20450	0.82	+1.3
4,441,201	-		PS417_20450	0.82	+1.0
4,441,201	-				+2.3
4,441,201	-		PS417_20450	0.82	-0.3
4,441,218	+		PS417_20450	0.84	+1.1
4,441,219	-		PS417_20450	0.84	+1.1
4,441,219	-		PS417_20450	0.84	-1.9
4,441,411	+				-0.3
4,441,468	-				+0.7
4,441,570	+				+0.8
4,441,571	-				+0.6
4,441,634	-		PS417_20455	0.11	+0.6
4,441,655	-		PS417_20455	0.12	-0.1
4,441,657	+		PS417_20455	0.12	-0.5
4,441,657	+		PS417_20455	0.12	-1.2
4,441,657	+		PS417_20455	0.12	-0.8
4,441,657	+		PS417_20455	0.12	+0.7
4,441,658	-				+0.7
4,441,658	-		PS417_20455	0.13	-0.3
4,441,658	-		PS417_20455	0.13	-0.6
4,441,751	-		PS417_20455	0.19	+0.7
4,441,766	+		PS417_20455	0.20	-0.6
4,441,766	+		PS417_20455	0.20	-1.0
4,441,766	+		PS417_20455	0.20	+1.2
4,441,900	+		PS417_20455	0.30	-0.7
4,441,900	+		PS417_20455	0.30	-1.2
4,441,901	-		PS417_20455	0.30	+1.9
4,441,901	-		PS417_20455	0.30	-2.1
4,441,901	-		PS417_20455	0.30	+0.4
4,441,970	+		PS417_20455	0.35	-0.7
4,441,972	+		PS417_20455	0.36	+0.4
4,441,973	-		PS417_20455	0.36	-0.1
4,442,094	+		PS417_20455	0.45	-1.8
4,442,094	+		PS417_20455	0.45	-1.2
4,442,113	+		PS417_20455	0.46	-2.0
4,442,113	+				+0.5
4,442,114	-		PS417_20455	0.46	-0.5
4,442,176	-		PS417_20455	0.51	-0.2
4,442,344	-		PS417_20455	0.63	-1.8
4,442,344	-		PS417_20455	0.63	-2.0
4,442,473	+		PS417_20455	0.72	-0.0
4,442,473	+		PS417_20455	0.72	+2.3
4,442,473	+		PS417_20455	0.72	-3.4
4,442,474	-		PS417_20455	0.73	-1.1
4,442,517	+		PS417_20455	0.76	-1.1
4,442,578	+		PS417_20455	0.80	-2.2
4,442,828	+				+0.8
4,442,828	+				+0.2
4,442,828	+				+0.3
4,442,919	+				-0.3
4,442,920	-				-1.8
4,442,953	+				-0.1
4,442,954	-				+1.3
4,442,959	+				-0.6
4,442,991	-				+0.1
4,442,991	-				-2.3
4,442,991	-				-0.5
4,442,991	-				-0.4
4,442,991	-				-0.9
4,442,991	-				+0.1
4,443,036	+				-0.3
4,443,056	-				-0.3
4,443,058	+				-0.2
4,443,059	-				-0.5
4,443,093	-				-0.3
4,443,113	+				-0.6
4,443,113	+				+0.4
4,443,114	-				+0.5
4,443,114	-				+0.3
4,443,281	+				+3.8
4,443,282	-				+0.1
4,443,282	-				-0.5
4,443,285	+				+0.3
4,443,285	+				-0.2
4,443,285	+				-0.4
4,443,285	+				+1.0
4,443,285	+				-1.0
4,443,285	+				-2.1
4,443,285	+				-0.4
4,443,285	+				-3.4
4,443,285	+				-1.2
4,443,285	+				+0.7
4,443,285	+				-1.2
4,443,286	-				-0.2
4,443,286	-				-0.7
4,443,286	-				+0.3
4,443,401	+		PS417_20460	0.13	+0.9
4,443,402	-		PS417_20460	0.13	-0.1
4,443,434	+		PS417_20460	0.15	+0.7
4,443,434	+		PS417_20460	0.15	+0.1
4,443,435	-		PS417_20460	0.15	+1.3
4,443,494	-		PS417_20460	0.18	-0.1
4,443,532	+		PS417_20460	0.19	-0.9
4,443,532	+		PS417_20460	0.19	+0.2
4,443,532	+		PS417_20460	0.19	-0.1
4,443,532	+		PS417_20460	0.19	-1.0
4,443,533	-		PS417_20460	0.20	+0.0
4,443,533	-		PS417_20460	0.20	-0.1
4,443,539	-		PS417_20460	0.20	-0.1
4,443,559	-		PS417_20460	0.21	-1.2
4,443,569	+		PS417_20460	0.21	-2.4
4,443,570	-		PS417_20460	0.21	+1.4
4,443,636	+		PS417_20460	0.24	-0.4
4,443,735	-		PS417_20460	0.29	-0.5
4,443,738	+		PS417_20460	0.29	-1.1
4,443,738	+		PS417_20460	0.29	-0.7
4,443,739	-		PS417_20460	0.29	-0.9
4,443,739	-		PS417_20460	0.29	+1.1
4,443,739	-		PS417_20460	0.29	+0.6
4,443,800	+		PS417_20460	0.32	-2.0
4,443,800	+		PS417_20460	0.32	-2.7
4,443,800	+		PS417_20460	0.32	-0.3
4,443,801	-		PS417_20460	0.32	-1.1
4,443,834	+		PS417_20460	0.33	-0.4
4,443,835	-		PS417_20460	0.33	-0.5
4,443,835	-		PS417_20460	0.33	-0.2
4,443,835	-		PS417_20460	0.33	-0.5
4,443,835	-		PS417_20460	0.33	+2.3