Strain Fitness in Pseudomonas simiae WCS417 around PS417_19990

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,340,648	-				-0.0
4,340,648	-				+0.6
4,340,677	-				-1.0
4,340,681	+				-2.7
4,340,682	-				+0.7
4,340,682	-				-0.4
4,340,682	-				-0.7
4,340,682	-				-1.8
4,340,682	-				+1.3
4,340,942	-				+1.1
4,340,942	-				+0.0
4,340,942	-				+0.1
4,340,942	-				-2.1
4,340,945	+				-2.3
4,340,945	+				-0.1
4,340,946	-				-0.7
4,340,950	-				-0.7
4,340,980	-				+0.7
4,341,043	+				+0.2
4,341,074	-				+2.3
4,341,090	-				-1.2
4,341,102	-				+0.8
4,341,104	+				-2.2
4,341,104	+				-1.1
4,341,105	-				+0.1
4,341,105	-				-1.6
4,341,105	-				+0.1
4,341,256	+		PS417_19985	0.67	+0.0
4,341,267	+		PS417_19985	0.72	+1.5
4,341,396	-				-1.9
4,341,431	+				-1.1
4,341,476	+				+1.3
4,341,487	+				+1.3
4,341,496	-				-0.9
4,341,606	+				-1.6
4,341,606	+				-1.2
4,341,606	+				-0.7
4,341,607	-				-0.2
4,341,607	-				+0.7
4,341,607	-				-0.1
4,341,637	+				-0.6
4,341,661	+		PS417_19990	0.11	-0.7
4,341,662	-		PS417_19990	0.11	-2.1
4,341,766	+		PS417_19990	0.33	+1.3
4,341,766	+		PS417_19990	0.33	-1.0
4,341,767	-				-0.7
4,341,808	+		PS417_19990	0.42	+0.4
4,341,808	+		PS417_19990	0.42	-1.0
4,341,808	+		PS417_19990	0.42	+1.3
4,341,808	+		PS417_19990	0.42	-1.2
4,341,808	+		PS417_19990	0.42	+1.3
4,341,808	+		PS417_19990	0.42	-1.9
4,341,808	+		PS417_19990	0.42	-1.2
4,341,809	-		PS417_19990	0.42	-1.7
4,341,809	-		PS417_19990	0.42	-1.4
4,341,954	+		PS417_19990	0.72	+0.3
4,341,954	+		PS417_19990	0.72	-0.2
4,341,955	-		PS417_19990	0.72	+0.5
4,341,955	-		PS417_19990	0.72	+0.4
4,341,993	+		PS417_19990	0.80	-1.2
4,342,174	+				-1.1
4,342,187	+				-3.3
4,342,231	+				+0.2
4,342,231	+				+2.6
4,342,232	-				+0.3
4,342,232	-				+1.3
4,342,246	+				-0.3
4,342,266	-				+1.5
4,342,401	-		PS417_19995	0.13	-0.7
4,342,521	-		PS417_19995	0.22	+1.3
4,342,554	+		PS417_19995	0.25	-0.0
4,342,600	-		PS417_19995	0.28	-0.3
4,342,704	+		PS417_19995	0.36	-0.7
4,342,921	-		PS417_19995	0.53	+0.4
4,343,051	+		PS417_19995	0.63	+0.7
4,343,052	-		PS417_19995	0.63	-0.7
4,343,052	-		PS417_19995	0.63	+2.7