Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19580 and PS417_19585 are separated by 13 nucleotides PS417_19585 and PS417_19590 overlap by 4 nucleotides PS417_19590 and PS417_19595 are separated by 117 nucleotides
PS417_19580: PS417_19580 - acetyl-CoA carboxylase, at 4,258,413 to 4,260,029
_19580
PS417_19585: PS417_19585 - acyl-CoA dehydrogenase, at 4,260,043 to 4,261,200
_19585
PS417_19590: PS417_19590 - enoyl-CoA hydratase, at 4,261,197 to 4,261,958
_19590
PS417_19595: PS417_19595 - 3-methylcrotonyl-CoA carboxylase, at 4,262,076 to 4,263,959
_19595
Position (kb)
4260
4261
4262 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4259.313 kb on + strand, within PS417_19580 at 4259.489 kb on + strand, within PS417_19580 at 4259.661 kb on + strand, within PS417_19580 at 4259.676 kb on + strand at 4259.676 kb on + strand at 4259.677 kb on - strand, within PS417_19580 at 4259.889 kb on + strand at 4260.017 kb on - strand at 4260.235 kb on + strand, within PS417_19585 at 4260.235 kb on + strand, within PS417_19585 at 4260.236 kb on - strand, within PS417_19585 at 4260.236 kb on - strand, within PS417_19585 at 4260.236 kb on - strand, within PS417_19585 at 4260.241 kb on + strand, within PS417_19585 at 4260.242 kb on - strand, within PS417_19585 at 4260.308 kb on + strand, within PS417_19585 at 4260.309 kb on - strand, within PS417_19585 at 4260.485 kb on - strand, within PS417_19585 at 4260.485 kb on - strand, within PS417_19585 at 4260.485 kb on - strand, within PS417_19585 at 4260.790 kb on - strand, within PS417_19585 at 4260.958 kb on + strand, within PS417_19585 at 4260.959 kb on - strand, within PS417_19585 at 4260.959 kb on - strand, within PS417_19585 at 4261.071 kb on + strand, within PS417_19585 at 4261.072 kb on - strand, within PS417_19585 at 4261.072 kb on - strand, within PS417_19585 at 4261.414 kb on + strand, within PS417_19590 at 4261.414 kb on + strand, within PS417_19590 at 4261.490 kb on - strand, within PS417_19590 at 4261.595 kb on - strand, within PS417_19590 at 4261.952 kb on + strand at 4262.069 kb on + strand at 4262.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 4,259,313 + PS417_19580 0.56 -1.1 4,259,489 + PS417_19580 0.67 +2.2 4,259,661 + PS417_19580 0.77 -0.9 4,259,676 + -0.6 4,259,676 + +2.2 4,259,677 - PS417_19580 0.78 +0.0 4,259,889 + -0.0 4,260,017 - +2.2 4,260,235 + PS417_19585 0.17 -0.7 4,260,235 + PS417_19585 0.17 +0.4 4,260,236 - PS417_19585 0.17 -1.1 4,260,236 - PS417_19585 0.17 +0.6 4,260,236 - PS417_19585 0.17 +1.2 4,260,241 + PS417_19585 0.17 +2.2 4,260,242 - PS417_19585 0.17 -1.3 4,260,308 + PS417_19585 0.23 -0.7 4,260,309 - PS417_19585 0.23 -1.2 4,260,485 - PS417_19585 0.38 -0.9 4,260,485 - PS417_19585 0.38 +2.2 4,260,485 - PS417_19585 0.38 +0.4 4,260,790 - PS417_19585 0.65 -0.2 4,260,958 + PS417_19585 0.79 +2.2 4,260,959 - PS417_19585 0.79 -0.6 4,260,959 - PS417_19585 0.79 -1.4 4,261,071 + PS417_19585 0.89 -1.8 4,261,072 - PS417_19585 0.89 +0.1 4,261,072 - PS417_19585 0.89 -2.7 4,261,414 + PS417_19590 0.28 +1.2 4,261,414 + PS417_19590 0.28 +0.2 4,261,490 - PS417_19590 0.38 -1.1 4,261,595 - PS417_19590 0.52 -1.0 4,261,952 + -0.3 4,262,069 + -1.7 4,262,176 - -0.4
Or see this region's nucleotide sequence