Strain Fitness in Pseudomonas simiae WCS417 around PS417_19575
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
4,256,549 | + | PS417_19570 | 0.45 | +1.8 | |
4,256,657 | + | PS417_19570 | 0.51 | -0.3 | |
4,256,658 | - | PS417_19570 | 0.51 | -0.3 | |
4,256,675 | + | PS417_19570 | 0.52 | -0.5 | |
4,256,808 | - | PS417_19570 | 0.60 | -0.4 | |
4,257,267 | - | PS417_19570 | 0.86 | -0.4 | |
4,257,267 | - | PS417_19570 | 0.86 | +0.6 | |
4,257,362 | + | -1.9 | |||
4,257,362 | + | -0.0 | |||
4,257,362 | + | +0.2 | |||
4,257,363 | - | -1.1 | |||
4,258,143 | + | PS417_19575 | 0.69 | +0.1 | |
4,258,143 | + | PS417_19575 | 0.69 | -0.6 | |
4,258,377 | + | +0.6 | |||
4,258,644 | + | PS417_19580 | 0.14 | -2.2 | |
4,258,872 | + | PS417_19580 | 0.28 | +0.5 | |
4,258,873 | - | PS417_19580 | 0.28 | -1.5 | |
4,258,989 | + | PS417_19580 | 0.36 | -0.7 | |
4,258,990 | - | PS417_19580 | 0.36 | -1.4 | |
4,259,313 | + | PS417_19580 | 0.56 | -1.1 |
Or see this region's nucleotide sequence