Strain Fitness in Pseudomonas simiae WCS417 around PS417_19555

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,252,535	+		PS417_19550	0.13	-1.0
4,252,535	+		PS417_19550	0.13	-0.1
4,252,536	-		PS417_19550	0.13	-2.0
4,252,830	+		PS417_19550	0.52	-1.8
4,252,831	-		PS417_19550	0.52	-0.1
4,252,968	+		PS417_19550	0.71	-1.5
4,253,084	+		PS417_19550	0.86	+0.2
4,253,084	+		PS417_19550	0.86	-1.5
4,253,219	+				+1.3
4,253,219	+				+0.8
4,253,219	+				-0.1
4,253,220	-				-0.6
4,253,220	-				-0.8
4,253,220	-				+1.2
4,253,220	-				-2.1
4,253,220	-				-0.4
4,253,220	-				-0.4
4,253,220	-				-0.8
4,253,319	-				-1.5
4,253,357	+				+0.2
4,253,357	+				-3.0
4,253,435	-				-0.7
4,253,435	-				-1.0
4,253,504	+				-0.8
4,253,504	+				-0.1
4,253,505	-				-1.7
4,253,583	+		PS417_19555	0.17	-2.0
4,253,584	-		PS417_19555	0.17	-1.5
4,253,616	-		PS417_19555	0.23	-1.6
4,253,616	-		PS417_19555	0.23	-0.7
4,253,686	+		PS417_19555	0.35	-2.3
4,253,686	+		PS417_19555	0.35	+0.5
4,253,896	+		PS417_19555	0.73	-2.4
4,254,022	-				-1.4
4,254,033	+				+0.1
4,254,033	+				+2.2
4,254,053	+				-1.9
4,254,054	-				-1.0
4,254,054	-				-1.0
4,254,113	+				+0.4
4,254,224	+		PS417_19560	0.18	+2.3
4,254,224	+		PS417_19560	0.18	+2.6
4,254,224	+		PS417_19560	0.18	+1.0
4,254,225	-		PS417_19560	0.18	-0.9
4,254,225	-		PS417_19560	0.18	-0.8
4,254,225	-		PS417_19560	0.18	+1.0
4,254,285	+		PS417_19560	0.25	-0.5
4,254,285	+		PS417_19560	0.25	-0.0
4,254,299	+		PS417_19560	0.27	+0.6
4,254,300	-		PS417_19560	0.27	+0.3
4,254,368	+		PS417_19560	0.36	+2.0
4,254,368	+		PS417_19560	0.36	-0.2
4,254,369	-		PS417_19560	0.36	+0.5
4,254,401	+		PS417_19560	0.40	+1.2
4,254,401	+		PS417_19560	0.40	+1.3
4,254,401	+		PS417_19560	0.40	+0.6
4,254,402	-		PS417_19560	0.40	-0.5
4,254,402	-		PS417_19560	0.40	+2.2
4,254,664	+		PS417_19560	0.73	+2.2
4,254,755	+		PS417_19560	0.85	-0.4
4,254,954	+				-0.1