Strain Fitness in Pseudomonas simiae WCS417 around PS417_19420
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
|---|---|---|---|---|---|
| remove | |||||
| 4,210,612 | - | +0.6 | |||
| 4,210,884 | + | PS417_19415 | 0.25 | -1.9 | |
| 4,211,058 | + | PS417_19415 | 0.43 | -3.8 | |
| 4,211,146 | - | PS417_19415 | 0.53 | -0.4 | |
| 4,211,599 | + | -0.6 | |||
| 4,211,928 | - | PS417_19420 | 0.68 | -1.1 | |
| 4,211,928 | - | PS417_19420 | 0.68 | -2.2 | |
| 4,211,965 | - | PS417_19420 | 0.75 | -3.1 | |
| 4,211,965 | - | PS417_19420 | 0.75 | -1.1 | |
| 4,212,061 | + | -3.3 | |||
| 4,212,061 | + | -1.3 | |||
| 4,212,061 | + | -0.2 | |||
| 4,212,062 | - | +2.2 | |||
| 4,212,146 | - | -3.3 | |||
| 4,212,146 | - | -3.9 | |||
| 4,212,589 | + | PS417_19425 | 0.45 | -2.3 |
Or see this region's nucleotide sequence