Strain Fitness in Pseudomonas simiae WCS417 around PS417_16365
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
|---|---|---|---|---|---|
| remove | |||||
| 3,579,705 | + | PS417_16360 | 0.49 | -0.1 | |
| 3,579,705 | + | PS417_16360 | 0.49 | -0.6 | |
| 3,579,706 | - | PS417_16360 | 0.49 | -0.6 | |
| 3,579,706 | - | PS417_16360 | 0.49 | +0.1 | |
| 3,579,706 | - | PS417_16360 | 0.49 | +2.2 | |
| 3,580,257 | - | PS417_16360 | 0.89 | +1.5 | |
| 3,580,277 | + | -0.1 | |||
| 3,580,277 | + | +0.3 | |||
| 3,580,277 | + | +1.2 | |||
| 3,580,420 | - | -0.7 | |||
| 3,581,049 | + | -1.1 | |||
| 3,581,049 | + | -0.9 | |||
| 3,581,211 | - | -0.5 | |||
| 3,581,218 | + | -0.4 | |||
| 3,581,250 | + | +2.2 | |||
| 3,581,250 | + | -0.2 | |||
| 3,581,294 | - | +1.5 | |||
| 3,581,297 | + | -0.6 | |||
| 3,581,298 | - | +3.3 | |||
| 3,581,298 | - | +3.2 | |||
| 3,581,298 | - | +3.0 | |||
| 3,581,342 | + | +2.6 | |||
| 3,581,342 | + | +1.2 | |||
| 3,581,355 | - | +2.8 | |||
| 3,581,407 | + | +3.9 | |||
| 3,581,818 | + | PS417_16370 | 0.18 | +3.7 |
Or see this region's nucleotide sequence