Strain Fitness in Pseudomonas simiae WCS417 around PS417_15960

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,491,454	-		PS417_15955	0.20	-2.1
3,492,001	-		PS417_15955	0.70	-0.5
3,492,052	+		PS417_15955	0.74	+0.8
3,492,629	+				+0.6
3,492,630	-				-1.4
3,492,630	-				-1.2
3,492,672	-		PS417_15960	0.11	-1.6
3,492,762	-		PS417_15960	0.14	-0.9
3,492,917	+		PS417_15960	0.19	-0.8
3,493,029	-		PS417_15960	0.22	+0.9
3,493,140	-		PS417_15960	0.26	-0.4
3,493,504	+		PS417_15960	0.38	-2.3
3,493,530	+		PS417_15960	0.39	+0.6
3,493,804	-		PS417_15960	0.48	-0.5
3,493,853	+		PS417_15960	0.49	-0.5
3,493,865	+		PS417_15960	0.50	-0.6
3,494,027	+		PS417_15960	0.55	-0.8
3,494,027	+				+2.2
3,494,028	-		PS417_15960	0.55	+1.1
3,494,126	+		PS417_15960	0.58	-0.4
3,494,126	+		PS417_15960	0.58	-0.5
3,494,127	-				+0.6
3,494,127	-		PS417_15960	0.58	-0.4
3,494,127	-		PS417_15960	0.58	+0.4
3,494,127	-		PS417_15960	0.58	-2.1
3,494,127	-		PS417_15960	0.58	-1.1
3,494,127	-		PS417_15960	0.58	+0.1
3,494,819	+		PS417_15960	0.80	+2.2
3,494,819	+		PS417_15960	0.80	-0.1
3,495,202	-				-0.7
3,495,253	+				-1.6
3,495,293	+				+2.2
3,495,408	+				-0.9
3,495,408	+				+2.2
3,495,409	-				-0.9
3,495,426	+				-0.4
3,495,470	-				+3.2
3,495,664	-				+0.6
3,495,786	-				-0.4
3,495,952	+				-0.5
3,495,988	+				-0.1
3,495,989	-				+0.9
3,495,989	-				-1.8
3,495,989	-				-0.5
3,495,989	-				-0.5
3,496,050	+				-2.0
3,496,050	+				+0.6
3,496,075	+				-0.1
3,496,076	-				+0.1
3,496,181	-				-1.7
3,496,323	+				+0.6
3,496,324	-				+0.2
3,496,324	-				+0.2
3,496,327	+				-1.5
3,496,327	+				-0.5
3,496,327	+				-0.8
3,496,327	+				+0.6
3,496,327	+				+0.1
3,496,327	+				+0.5
3,496,328	-				+2.2
3,496,328	-				-1.6
3,496,328	-				-2.5
3,496,409	+				-0.2
3,496,410	-				+1.6
3,496,410	-				-0.6
3,496,410	-				+0.6