Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15800 and PS417_15805 overlap by 1 nucleotides PS417_15805 and PS417_15810 are separated by 71 nucleotides PS417_15810 and PS417_15815 are separated by 125 nucleotides PS417_15815 and PS417_15820 are separated by 36 nucleotides
PS417_15800: PS417_15800 - photosynthetic protein synthase I, at 3,462,841 to 3,463,449
_15800
PS417_15805: PS417_15805 - transporter, at 3,463,449 to 3,463,916
_15805
PS417_15810: PS417_15810 - hypothetical protein, at 3,463,988 to 3,464,317
_15810
PS417_15815: PS417_15815 - hydrolase, at 3,464,443 to 3,464,952
_15815
PS417_15820: PS417_15820 - universal stress protein UspA, at 3,464,989 to 3,465,891
_15820
Position (kb)
3464
3465 Strain fitness (log2 ratio)
-2
-1
0
1 at 3463.476 kb on - strand at 3463.482 kb on - strand at 3463.758 kb on + strand, within PS417_15805 at 3463.979 kb on + strand at 3463.981 kb on + strand at 3464.141 kb on - strand, within PS417_15810 at 3464.173 kb on - strand, within PS417_15810 at 3464.184 kb on + strand, within PS417_15810 at 3464.217 kb on + strand, within PS417_15810 at 3464.217 kb on + strand at 3464.218 kb on - strand, within PS417_15810 at 3464.231 kb on + strand at 3464.257 kb on - strand, within PS417_15810 at 3464.656 kb on + strand, within PS417_15815 at 3464.656 kb on + strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.658 kb on + strand, within PS417_15815 at 3464.659 kb on - strand, within PS417_15815 at 3464.950 kb on + strand at 3464.996 kb on - strand at 3465.601 kb on + strand, within PS417_15820 at 3465.702 kb on - strand, within PS417_15820 at 3465.767 kb on + strand, within PS417_15820 at 3465.880 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,463,476 - +1.3 3,463,482 - -1.8 3,463,758 + PS417_15805 0.66 -0.6 3,463,979 + -0.8 3,463,981 + -0.6 3,464,141 - PS417_15810 0.46 -0.1 3,464,173 - PS417_15810 0.56 -1.0 3,464,184 + PS417_15810 0.59 +1.3 3,464,217 + PS417_15810 0.69 -0.6 3,464,217 + +0.3 3,464,218 - PS417_15810 0.70 +0.1 3,464,231 + +1.3 3,464,257 - PS417_15810 0.82 +1.3 3,464,656 + PS417_15815 0.42 +0.9 3,464,656 + PS417_15815 0.42 -0.2 3,464,657 - PS417_15815 0.42 -0.9 3,464,657 - PS417_15815 0.42 -0.2 3,464,657 - PS417_15815 0.42 -1.8 3,464,658 + PS417_15815 0.42 +0.4 3,464,659 - PS417_15815 0.42 -0.7 3,464,950 + -0.2 3,464,996 - +0.5 3,465,601 + PS417_15820 0.68 -0.3 3,465,702 - PS417_15820 0.79 +0.7 3,465,767 + PS417_15820 0.86 -0.4 3,465,880 - -0.3
Or see this region's nucleotide sequence