Strain Fitness in Pseudomonas simiae WCS417 around PS417_15245

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,341,913	+		PS417_15235	0.86	-0.6
3,341,914	-		PS417_15235	0.86	+0.2
3,341,952	+		PS417_15235	0.90	+0.6
3,342,056	+				+1.6
3,342,056	+				-0.4
3,342,056	+				-0.4
3,342,057	-				-0.3
3,342,057	-				-1.4
3,342,301	-		PS417_15240	0.29	+1.4
3,342,328	+		PS417_15240	0.32	-2.5
3,342,432	+		PS417_15240	0.45	+0.1
3,342,432	+		PS417_15240	0.45	-1.3
3,342,432	+		PS417_15240	0.45	-0.6
3,342,433	-		PS417_15240	0.45	+0.2
3,342,433	-		PS417_15240	0.45	-0.4
3,342,513	+		PS417_15240	0.55	+1.6
3,342,602	-				-0.4
3,342,786	+		PS417_15240	0.87	-1.4
3,342,786	+		PS417_15240	0.87	-0.6
3,342,787	-		PS417_15240	0.88	+0.5
3,342,787	-		PS417_15240	0.88	+0.1
3,342,888	+				-0.2
3,342,889	-				-0.6
3,342,961	-				+2.6
3,343,165	-		PS417_15245	0.13	+0.3
3,343,165	-		PS417_15245	0.13	-0.2
3,343,203	+		PS417_15245	0.15	-1.6
3,343,204	-		PS417_15245	0.15	+1.6
3,343,204	-				+1.6
3,343,372	+		PS417_15245	0.23	-2.2
3,343,750	-		PS417_15245	0.42	-0.7
3,343,794	+		PS417_15245	0.44	-0.1
3,343,795	-		PS417_15245	0.44	+0.5
3,343,795	-				+3.8
3,343,804	-		PS417_15245	0.44	-1.2
3,344,012	+		PS417_15245	0.54	-1.0
3,344,013	-		PS417_15245	0.54	-1.3
3,344,138	+		PS417_15245	0.60	-0.6
3,344,139	-		PS417_15245	0.60	-1.7
3,344,139	-		PS417_15245	0.60	-0.3
3,344,199	+		PS417_15245	0.63	+0.3
3,344,199	+		PS417_15245	0.63	-1.1
3,344,199	+		PS417_15245	0.63	-1.2
3,344,372	+		PS417_15245	0.72	-1.3
3,344,372	+		PS417_15245	0.72	-0.4
3,344,373	-		PS417_15245	0.72	+2.8
3,344,373	-		PS417_15245	0.72	-1.9
3,344,373	-		PS417_15245	0.72	+0.2
3,344,373	-		PS417_15245	0.72	-1.5
3,344,470	+		PS417_15245	0.76	-0.6
3,344,648	+		PS417_15245	0.85	+0.5
3,344,649	-		PS417_15245	0.85	-2.4
3,344,649	-		PS417_15245	0.85	+0.7
3,345,182	+				-0.2
3,345,201	+				-0.4
3,345,289	+				+0.9
3,345,564	+		PS417_15250	0.81	-0.4
3,345,596	+				-0.9
3,345,646	-				-1.1
3,345,646	-				+0.6
3,345,646	-				-0.9
3,345,844	+		PS417_15255	0.25	-0.3
3,345,845	-		PS417_15255	0.25	+0.1
3,345,845	-		PS417_15255	0.25	-0.5