Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15165 and PS417_15170 are separated by 111 nucleotides PS417_15170 and PS417_15175 are separated by 31 nucleotides
PS417_15165: PS417_15165 - 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase, at 3,322,581 to 3,323,696
_15165
PS417_15170: PS417_15170 - long-chain fatty acid--CoA ligase, at 3,323,808 to 3,325,511
_15170
PS417_15175: PS417_15175 - acetyl-CoA acetyltransferase, at 3,325,543 to 3,326,841
_15175
Position (kb)
3323
3324
3325
3326 Strain fitness (log2 ratio)
-2
-1
0
1 at 3322.968 kb on + strand at 3322.969 kb on - strand, within PS417_15165 at 3322.994 kb on + strand, within PS417_15165 at 3322.994 kb on + strand, within PS417_15165 at 3323.542 kb on + strand, within PS417_15165 at 3323.694 kb on + strand at 3323.695 kb on - strand at 3323.752 kb on + strand at 3323.879 kb on - strand at 3323.905 kb on + strand at 3323.905 kb on + strand at 3324.001 kb on - strand, within PS417_15170 at 3324.095 kb on + strand, within PS417_15170 at 3324.124 kb on + strand, within PS417_15170 at 3324.214 kb on + strand at 3324.794 kb on + strand, within PS417_15170 at 3324.795 kb on - strand, within PS417_15170 at 3324.847 kb on + strand, within PS417_15170 at 3324.847 kb on + strand, within PS417_15170 at 3324.848 kb on - strand, within PS417_15170 at 3324.848 kb on - strand, within PS417_15170 at 3325.014 kb on - strand, within PS417_15170 at 3325.238 kb on + strand, within PS417_15170 at 3325.330 kb on + strand at 3325.357 kb on + strand at 3325.357 kb on + strand at 3325.500 kb on + strand at 3325.501 kb on - strand at 3325.501 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,322,968 + -0.1 3,322,969 - PS417_15165 0.35 -0.8 3,322,994 + PS417_15165 0.37 +0.6 3,322,994 + PS417_15165 0.37 -1.8 3,323,542 + PS417_15165 0.86 -1.4 3,323,694 + -0.2 3,323,695 - +1.2 3,323,752 + +0.8 3,323,879 - -0.4 3,323,905 + -0.3 3,323,905 + +0.8 3,324,001 - PS417_15170 0.11 +1.4 3,324,095 + PS417_15170 0.17 +0.6 3,324,124 + PS417_15170 0.19 -1.5 3,324,214 + +1.2 3,324,794 + PS417_15170 0.58 -2.2 3,324,795 - PS417_15170 0.58 -0.0 3,324,847 + PS417_15170 0.61 -0.6 3,324,847 + PS417_15170 0.61 +0.6 3,324,848 - PS417_15170 0.61 +0.4 3,324,848 - PS417_15170 0.61 +0.6 3,325,014 - PS417_15170 0.71 +0.4 3,325,238 + PS417_15170 0.84 +0.1 3,325,330 + -0.1 3,325,357 + -0.1 3,325,357 + +1.0 3,325,500 + -1.6 3,325,501 - -0.9 3,325,501 - -0.6
Or see this region's nucleotide sequence