Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14740 and PS417_14745 are separated by 40 nucleotides PS417_14745 and PS417_14755 are separated by 103 nucleotides
PS417_14740: PS417_14740 - chemotaxis protein, at 3,222,440 to 3,224,377
_14740
PS417_14745: PS417_14745 - hypothetical protein, at 3,224,418 to 3,225,194
_14745
PS417_14755: PS417_14755 - UV damage repair endonuclease UvdE, at 3,225,298 to 3,226,329
_14755
Position (kb)
3224
3225
3226 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3223.609 kb on + strand, within PS417_14740 at 3223.989 kb on + strand, within PS417_14740 at 3224.396 kb on - strand at 3224.420 kb on - strand at 3224.614 kb on - strand, within PS417_14745 at 3224.704 kb on + strand, within PS417_14745 at 3224.862 kb on + strand, within PS417_14745 at 3225.044 kb on - strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.049 kb on + strand, within PS417_14745 at 3225.050 kb on - strand, within PS417_14745 at 3225.066 kb on + strand, within PS417_14745 at 3225.177 kb on - strand at 3225.266 kb on + strand at 3225.266 kb on + strand at 3225.267 kb on - strand at 3225.267 kb on - strand at 3225.329 kb on + strand at 3225.330 kb on - strand at 3225.545 kb on + strand, within PS417_14755 at 3225.617 kb on + strand at 3225.930 kb on - strand, within PS417_14755 at 3226.121 kb on + strand, within PS417_14755 at 3226.122 kb on - strand, within PS417_14755 at 3226.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,223,609 + PS417_14740 0.60 +0.0 3,223,989 + PS417_14740 0.80 +0.2 3,224,396 - -0.1 3,224,420 - +0.0 3,224,614 - PS417_14745 0.25 -0.8 3,224,704 + PS417_14745 0.37 -1.7 3,224,862 + PS417_14745 0.57 +0.6 3,225,044 - PS417_14745 0.81 -1.0 3,225,049 + PS417_14745 0.81 -0.4 3,225,049 + PS417_14745 0.81 -3.5 3,225,049 + PS417_14745 0.81 -1.7 3,225,049 + PS417_14745 0.81 -0.4 3,225,049 + PS417_14745 0.81 +0.1 3,225,049 + PS417_14745 0.81 +0.9 3,225,050 - PS417_14745 0.81 -1.8 3,225,066 + PS417_14745 0.83 +0.2 3,225,177 - -2.1 3,225,266 + -0.6 3,225,266 + -0.4 3,225,267 - -1.1 3,225,267 - +0.3 3,225,329 + -0.4 3,225,330 - +0.2 3,225,545 + PS417_14755 0.24 +0.7 3,225,617 + +0.2 3,225,930 - PS417_14755 0.61 +1.1 3,226,121 + PS417_14755 0.80 -0.3 3,226,122 - PS417_14755 0.80 -0.3 3,226,122 - +3.2
Or see this region's nucleotide sequence