Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01440 and PS417_01445 are separated by 289 nucleotides PS417_01445 and PS417_01450 overlap by 4 nucleotides
PS417_01440: PS417_01440 - hypothetical protein, at 320,468 to 321,907
_01440
PS417_01445: PS417_01445 - hypothetical protein, at 322,197 to 322,472
_01445
PS417_01450: PS417_01450 - integrase, at 322,469 to 323,449
_01450
Position (kb) 322
323 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 321.503 kb on + strand, within PS417_01440 at 321.546 kb on - strand, within PS417_01440 at 321.687 kb on + strand, within PS417_01440 at 321.688 kb on - strand, within PS417_01440 at 321.737 kb on - strand, within PS417_01440 at 321.793 kb on - strand at 321.872 kb on - strand at 321.930 kb on - strand at 321.930 kb on - strand at 321.947 kb on - strand at 322.000 kb on + strand at 322.003 kb on + strand at 322.004 kb on - strand at 322.004 kb on - strand at 322.258 kb on + strand, within PS417_01445 at 322.258 kb on + strand, within PS417_01445 at 322.258 kb on + strand, within PS417_01445 at 322.258 kb on + strand, within PS417_01445 at 322.259 kb on - strand, within PS417_01445 at 322.259 kb on - strand, within PS417_01445 at 322.262 kb on - strand, within PS417_01445 at 322.264 kb on + strand, within PS417_01445 at 322.265 kb on - strand, within PS417_01445 at 322.265 kb on - strand, within PS417_01445 at 322.265 kb on - strand, within PS417_01445 at 322.344 kb on - strand, within PS417_01445 at 322.347 kb on + strand, within PS417_01445 at 322.347 kb on + strand, within PS417_01445 at 322.395 kb on + strand, within PS417_01445 at 322.395 kb on + strand, within PS417_01445 at 322.396 kb on - strand, within PS417_01445 at 322.396 kb on - strand, within PS417_01445 at 322.396 kb on - strand, within PS417_01445 at 322.396 kb on - strand, within PS417_01445 at 322.488 kb on + strand at 322.488 kb on + strand at 322.552 kb on + strand at 322.552 kb on + strand at 322.552 kb on + strand at 322.553 kb on - strand at 322.553 kb on - strand at 322.638 kb on + strand, within PS417_01450 at 322.639 kb on - strand, within PS417_01450 at 322.639 kb on - strand, within PS417_01450 at 322.639 kb on - strand, within PS417_01450 at 322.678 kb on + strand, within PS417_01450 at 322.760 kb on - strand, within PS417_01450 at 322.804 kb on + strand, within PS417_01450 at 322.805 kb on - strand, within PS417_01450 at 322.805 kb on - strand, within PS417_01450 at 322.805 kb on - strand, within PS417_01450 at 322.805 kb on - strand, within PS417_01450 at 322.916 kb on + strand, within PS417_01450 at 322.916 kb on + strand, within PS417_01450 at 322.917 kb on - strand, within PS417_01450 at 322.917 kb on - strand, within PS417_01450 at 323.016 kb on - strand, within PS417_01450 at 323.016 kb on - strand, within PS417_01450 at 323.118 kb on + strand, within PS417_01450 at 323.119 kb on - strand, within PS417_01450 at 323.119 kb on - strand, within PS417_01450 at 323.159 kb on - strand, within PS417_01450 at 323.217 kb on - strand, within PS417_01450 at 323.217 kb on - strand, within PS417_01450 at 323.217 kb on - strand, within PS417_01450 at 323.230 kb on - strand, within PS417_01450 at 323.230 kb on - strand, within PS417_01450 at 323.363 kb on + strand at 323.364 kb on - strand at 323.364 kb on - strand at 323.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 321,503 + PS417_01440 0.72 -0.7 321,546 - PS417_01440 0.75 -1.0 321,687 + PS417_01440 0.85 +0.1 321,688 - PS417_01440 0.85 -0.0 321,737 - PS417_01440 0.88 -1.2 321,793 - +0.8 321,872 - +1.8 321,930 - -0.3 321,930 - -0.0 321,947 - -1.1 322,000 + +0.3 322,003 + -1.1 322,004 - -0.6 322,004 - +2.0 322,258 + PS417_01445 0.22 -1.0 322,258 + PS417_01445 0.22 -0.3 322,258 + PS417_01445 0.22 +0.3 322,258 + PS417_01445 0.22 -0.8 322,259 - PS417_01445 0.22 -0.8 322,259 - PS417_01445 0.22 -0.5 322,262 - PS417_01445 0.24 -0.9 322,264 + PS417_01445 0.24 -1.4 322,265 - PS417_01445 0.25 -0.4 322,265 - PS417_01445 0.25 -0.6 322,265 - PS417_01445 0.25 -1.0 322,344 - PS417_01445 0.53 -0.5 322,347 + PS417_01445 0.54 -0.7 322,347 + PS417_01445 0.54 +0.4 322,395 + PS417_01445 0.72 -1.4 322,395 + PS417_01445 0.72 -0.2 322,396 - PS417_01445 0.72 -1.5 322,396 - PS417_01445 0.72 +0.4 322,396 - PS417_01445 0.72 +1.3 322,396 - PS417_01445 0.72 -1.8 322,488 + +0.3 322,488 + +1.2 322,552 + +1.1 322,552 + -2.1 322,552 + -2.4 322,553 - -1.1 322,553 - -0.2 322,638 + PS417_01450 0.17 -0.3 322,639 - PS417_01450 0.17 +0.8 322,639 - PS417_01450 0.17 +0.3 322,639 - PS417_01450 0.17 +0.0 322,678 + PS417_01450 0.21 +4.3 322,760 - PS417_01450 0.30 -0.2 322,804 + PS417_01450 0.34 +0.8 322,805 - PS417_01450 0.34 -0.1 322,805 - PS417_01450 0.34 -0.3 322,805 - PS417_01450 0.34 +0.2 322,805 - PS417_01450 0.34 -0.0 322,916 + PS417_01450 0.46 +1.5 322,916 + PS417_01450 0.46 +0.9 322,917 - PS417_01450 0.46 -2.3 322,917 - PS417_01450 0.46 -0.8 323,016 - PS417_01450 0.56 +2.3 323,016 - PS417_01450 0.56 +0.0 323,118 + PS417_01450 0.66 -1.8 323,119 - PS417_01450 0.66 -0.2 323,119 - PS417_01450 0.66 -0.7 323,159 - PS417_01450 0.70 +0.0 323,217 - PS417_01450 0.76 -0.4 323,217 - PS417_01450 0.76 -1.1 323,217 - PS417_01450 0.76 +0.3 323,230 - PS417_01450 0.78 -0.7 323,230 - PS417_01450 0.78 -1.8 323,363 + +2.3 323,364 - +1.0 323,364 - -0.2 323,364 - +0.4
Or see this region's nucleotide sequence