Strain Fitness in Pseudomonas simiae WCS417 around PS417_00145

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
30,687	+		PS417_00140	0.49	-0.5
30,687	+		PS417_00140	0.49	-0.4
30,705	+		PS417_00140	0.50	+0.3
30,706	-		PS417_00140	0.50	+0.4
30,706	-		PS417_00140	0.50	-0.2
30,763	-		PS417_00140	0.54	-0.8
30,817	+		PS417_00140	0.57	-0.8
30,817	+				+0.7
30,827	+		PS417_00140	0.58	+0.0
30,827	+		PS417_00140	0.58	-0.9
30,827	+		PS417_00140	0.58	+1.1
30,827	+		PS417_00140	0.58	+1.0
30,828	-		PS417_00140	0.58	+0.9
30,828	-		PS417_00140	0.58	-1.2
30,828	-		PS417_00140	0.58	-0.3
30,874	-		PS417_00140	0.61	-0.7
30,952	-		PS417_00140	0.66	+0.2
30,952	-		PS417_00140	0.66	+2.3
30,952	-		PS417_00140	0.66	+0.7
31,105	-		PS417_00140	0.76	-1.0
31,206	+		PS417_00140	0.83	-0.7
31,206	+		PS417_00140	0.83	+0.0
31,215	+		PS417_00140	0.83	-0.1
31,215	+		PS417_00140	0.83	-0.6
31,215	+		PS417_00140	0.83	-0.2
31,216	-		PS417_00140	0.83	-1.0
31,216	-		PS417_00140	0.83	-1.6
31,216	-		PS417_00140	0.83	+0.2
31,216	-		PS417_00140	0.83	+0.5
31,329	+				+0.0
31,401	+				-0.8
31,402	-				-0.3
31,925	+		PS417_00145	0.37	+0.4
31,948	+		PS417_00145	0.40	-1.2
31,948	+		PS417_00145	0.40	-0.3
31,948	+		PS417_00145	0.40	-1.7
31,948	+		PS417_00145	0.40	-2.3
31,948	+		PS417_00145	0.40	-1.5
31,948	+		PS417_00145	0.40	-0.2
31,948	+		PS417_00145	0.40	+1.3
31,949	-		PS417_00145	0.40	+0.6
31,949	-		PS417_00145	0.40	-0.3
32,256	+		PS417_00145	0.72	-2.6
32,256	+		PS417_00145	0.72	-0.8
32,256	+		PS417_00145	0.72	-0.3
32,256	+		PS417_00145	0.72	-0.7
32,256	+		PS417_00145	0.72	-1.5
32,257	-		PS417_00145	0.72	-0.7
32,257	-		PS417_00145	0.72	-0.5
32,391	+		PS417_00145	0.86	-0.3
32,391	+		PS417_00145	0.86	+0.9
32,391	+		PS417_00145	0.86	-0.4
32,392	-		PS417_00145	0.87	-0.8
32,518	-				-1.4
32,518	-				-1.3
32,559	+				+2.3
32,559	+				-1.4
32,559	+				-2.4
32,559	+				+0.7
32,560	-				+2.0
32,581	-				-0.3
32,581	-				-0.7
32,584	+		PS417_00150	0.10	-0.1
32,584	+		PS417_00150	0.10	+0.4
32,585	-		PS417_00150	0.10	-0.7
32,585	-		PS417_00150	0.10	-1.0
32,728	+		PS417_00150	0.54	-0.8
32,728	+		PS417_00150	0.54	+0.7
32,728	+		PS417_00150	0.54	-0.2
32,729	-		PS417_00150	0.54	+1.1
32,729	-		PS417_00150	0.54	-1.1
32,828	-				+2.3
32,828	-		PS417_00150	0.84	-0.8
32,878	+				+0.0
32,913	-				-0.8
32,934	+				-1.1
32,934	+				+0.1
32,935	-				-2.3
32,940	+				-0.3
32,942	+				-1.1
33,028	+				+0.0
33,028	+				-0.0
33,029	-				-0.8
33,030	+				+2.3
33,297	+		PS417_00155	0.33	+3.9
33,298	-		PS417_00155	0.33	+0.4
33,483	+		PS417_00155	0.53	-0.8
33,499	-		PS417_00155	0.54	+1.0