Strain Fitness in Pseudomonas simiae WCS417 around PS417_13415

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,950,406	+				-0.1
2,950,407	-		PS417_13405	0.88	-0.4
2,950,444	+		PS417_13405	0.89	-0.3
2,950,494	+				+0.3
2,950,495	-				+0.1
2,950,578	-				+1.6
2,950,610	+				+0.8
2,950,611	-				-1.2
2,950,611	-				+0.9
2,950,616	+				-0.7
2,950,617	-				-0.7
2,950,617	-				-1.1
2,950,726	+				-0.3
2,950,836	+		PS417_13410	0.32	-0.5
2,951,022	-				+1.6
2,951,035	+				+0.5
2,951,036	-				-0.0
2,951,382	+		PS417_13415	0.13	-1.4
2,951,390	+		PS417_13415	0.14	-1.5
2,951,391	-		PS417_13415	0.14	-1.0
2,951,391	-		PS417_13415	0.14	-1.0
2,951,391	-		PS417_13415	0.14	-0.1
2,951,393	+		PS417_13415	0.14	+0.7
2,951,393	+		PS417_13415	0.14	-1.4
2,951,393	+		PS417_13415	0.14	-1.3
2,951,393	+		PS417_13415	0.14	-0.1
2,951,394	-		PS417_13415	0.14	-2.0
2,951,394	-		PS417_13415	0.14	+1.6
2,951,394	-		PS417_13415	0.14	-2.1
2,951,757	-		PS417_13415	0.59	-0.9
2,951,778	-		PS417_13415	0.62	+0.5
2,951,826	-		PS417_13415	0.68	-0.2
2,951,826	-		PS417_13415	0.68	+0.2
2,951,886	-		PS417_13415	0.75	+0.3
2,952,000	-		PS417_13415	0.89	+0.1
2,952,041	+				+0.7
2,952,041	+				-1.9
2,952,042	-				-0.8
2,952,111	+				-0.5
2,952,163	+				-0.1
2,952,164	-				+3.3
2,952,277	-				-1.2
2,952,354	-		PS417_13420	0.15	-0.9
2,952,504	+		PS417_13420	0.26	-0.3
2,952,666	+		PS417_13420	0.38	+0.7
2,952,678	+		PS417_13420	0.38	-0.7
2,952,678	+		PS417_13420	0.38	-2.5
2,952,678	+				-0.9
2,952,678	+		PS417_13420	0.38	+0.2
2,952,679	-		PS417_13420	0.38	+0.5
2,952,679	-		PS417_13420	0.38	-1.1
2,952,679	-		PS417_13420	0.38	-2.1
2,952,679	-		PS417_13420	0.38	-0.1
2,952,763	-		PS417_13420	0.44	-1.7
2,952,858	+		PS417_13420	0.51	+0.3
2,953,006	-		PS417_13420	0.62	+0.1