Strain Fitness in Pseudomonas simiae WCS417 around PS417_13045

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,849,927	-				-0.9
2,850,186	-		PS417_13040	0.19	-0.0
2,850,187	+		PS417_13040	0.20	-0.5
2,850,187	+		PS417_13040	0.20	+3.3
2,850,187	+		PS417_13040	0.20	-0.6
2,850,188	-		PS417_13040	0.20	-1.1
2,850,188	-		PS417_13040	0.20	+1.7
2,850,194	-		PS417_13040	0.21	-2.9
2,850,401	-		PS417_13040	0.53	-0.3
2,850,413	+		PS417_13040	0.54	+1.8
2,850,497	-		PS417_13040	0.67	+0.8
2,850,544	+		PS417_13040	0.75	-2.1
2,850,544	+		PS417_13040	0.75	-1.4
2,850,544	+		PS417_13040	0.75	-0.3
2,850,544	+		PS417_13040	0.75	-1.9
2,850,545	-		PS417_13040	0.75	+1.1
2,850,547	+		PS417_13040	0.75	-0.6
2,850,547	+		PS417_13040	0.75	-0.7
2,850,548	-		PS417_13040	0.75	+0.0
2,850,550	+		PS417_13040	0.76	-1.5
2,850,551	-		PS417_13040	0.76	-1.3
2,850,746	-				-0.5
2,850,746	-				+0.3
2,850,850	+				-0.5
2,850,854	+				-0.9
2,850,854	+				-0.3
2,850,854	+				+0.8
2,850,854	+				-0.1
2,850,855	-				+1.5
2,850,860	-				+0.1
2,850,874	+				+3.0
2,850,874	+				-0.6
2,851,197	+		PS417_13045	0.19	+2.3
2,851,197	+		PS417_13045	0.19	-0.4
2,851,198	-		PS417_13045	0.19	-1.9
2,851,549	+		PS417_13045	0.39	-0.1
2,851,549	+		PS417_13045	0.39	+1.3
2,851,551	+		PS417_13045	0.40	+0.7
2,851,630	+		PS417_13045	0.44	+0.8
2,851,676	-		PS417_13045	0.47	-3.0
2,851,822	+		PS417_13045	0.55	-0.9
2,851,822	+		PS417_13045	0.55	-0.1
2,851,822	+		PS417_13045	0.55	+1.2
2,851,841	-		PS417_13045	0.56	-2.3
2,851,841	-		PS417_13045	0.56	-0.8
2,852,042	-		PS417_13045	0.68	-1.4
2,852,042	-		PS417_13045	0.68	-1.1
2,852,042	-		PS417_13045	0.68	-2.4
2,852,149	+		PS417_13045	0.74	+1.3
2,852,149	+		PS417_13045	0.74	+0.6
2,852,150	-		PS417_13045	0.74	-1.5
2,852,150	-		PS417_13045	0.74	-1.8
2,852,150	-		PS417_13045	0.74	-0.3
2,852,938	-		PS417_13050	0.57	-1.3
2,853,027	+		PS417_13050	0.74	+2.9
2,853,056	+		PS417_13050	0.79	-0.7
2,853,124	-				-2.6
2,853,124	-				+0.3
2,853,259	+		PS417_13055	0.18	-0.7
2,853,539	-		PS417_13055	0.67	+0.3