Strain Fitness in Pseudomonas simiae WCS417 around PS417_12660
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,755,656 | - | -0.4 | |||
2,755,664 | - | +0.9 | |||
2,756,252 | - | PS417_12655 | 0.54 | -0.4 | |
2,756,268 | + | PS417_12655 | 0.56 | -0.7 | |
2,756,268 | + | PS417_12655 | 0.56 | -0.1 | |
2,756,268 | + | PS417_12655 | 0.56 | +2.3 | |
2,756,269 | - | PS417_12655 | 0.56 | +1.3 | |
2,756,658 | - | PS417_12660 | 0.31 | -1.8 | |
2,756,756 | - | PS417_12660 | 0.80 | -0.3 | |
2,756,955 | + | +0.3 | |||
2,756,955 | + | -0.2 | |||
2,756,956 | - | -0.4 | |||
2,756,956 | - | -0.3 | |||
2,756,956 | - | +0.2 | |||
2,757,058 | + | -1.3 | |||
2,757,058 | + | -3.9 | |||
2,757,075 | + | -0.3 | |||
2,757,122 | - | -0.3 | |||
2,757,151 | + | +0.1 | |||
2,757,169 | - | +0.1 | |||
2,757,274 | + | PS417_12665 | 0.20 | +2.3 | |
2,757,275 | - | PS417_12665 | 0.20 | -0.8 | |
2,757,437 | + | PS417_12665 | 0.36 | -1.0 |
Or see this region's nucleotide sequence