Strain Fitness in Pseudomonas simiae WCS417 around PS417_11380
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,450,130 | - | PS417_11370 | 0.81 | -0.4 | |
2,450,248 | - | -0.9 | |||
2,450,438 | + | PS417_11375 | 0.39 | -0.7 | |
2,450,438 | + | PS417_11375 | 0.39 | -0.4 | |
2,450,439 | - | PS417_11375 | 0.39 | -0.1 | |
2,451,097 | + | PS417_11380 | 0.40 | -0.3 | |
2,451,098 | - | PS417_11380 | 0.41 | -1.0 | |
2,451,098 | - | PS417_11380 | 0.41 | -0.6 | |
2,451,200 | - | PS417_11380 | 0.51 | -1.2 | |
2,451,880 | - | PS417_11385 | 0.17 | +0.0 | |
2,452,355 | - | PS417_11385 | 0.66 | +2.2 |
Or see this region's nucleotide sequence