Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01120 and PS417_01125 are separated by 179 nucleotides PS417_01125 and PS417_01130 are separated by 108 nucleotides
PS417_01120: PS417_01120 - choline transporter, at 245,049 to 247,049
_01120
PS417_01125: PS417_01125 - cysteine desulfhydrase, at 247,229 to 248,557
_01125
PS417_01130: PS417_01130 - L-glyceraldehyde 3-phosphate reductase, at 248,666 to 249,703
_01130
Position (kb) 247
248
249 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 246.244 kb on - strand, within PS417_01120 at 246.262 kb on - strand, within PS417_01120 at 246.353 kb on + strand, within PS417_01120 at 246.353 kb on + strand, within PS417_01120 at 246.354 kb on - strand, within PS417_01120 at 246.354 kb on - strand, within PS417_01120 at 246.354 kb on - strand, within PS417_01120 at 246.354 kb on - strand, within PS417_01120 at 246.354 kb on - strand, within PS417_01120 at 246.556 kb on - strand, within PS417_01120 at 246.684 kb on + strand, within PS417_01120 at 246.855 kb on + strand at 246.957 kb on + strand at 246.957 kb on + strand at 246.958 kb on - strand at 246.972 kb on + strand at 247.012 kb on - strand at 247.151 kb on + strand at 247.151 kb on + strand at 247.255 kb on + strand at 247.255 kb on + strand at 247.256 kb on - strand at 247.279 kb on + strand at 247.418 kb on + strand, within PS417_01125 at 247.463 kb on + strand, within PS417_01125 at 247.464 kb on - strand, within PS417_01125 at 247.635 kb on - strand, within PS417_01125 at 247.748 kb on - strand, within PS417_01125 at 247.748 kb on - strand, within PS417_01125 at 247.883 kb on + strand, within PS417_01125 at 247.884 kb on - strand, within PS417_01125 at 247.884 kb on - strand, within PS417_01125 at 247.884 kb on - strand, within PS417_01125 at 247.902 kb on - strand, within PS417_01125 at 247.902 kb on - strand, within PS417_01125 at 247.904 kb on + strand, within PS417_01125 at 248.103 kb on - strand, within PS417_01125 at 248.103 kb on - strand, within PS417_01125 at 248.297 kb on + strand, within PS417_01125 at 248.298 kb on - strand, within PS417_01125 at 248.352 kb on - strand, within PS417_01125 at 248.528 kb on + strand at 248.528 kb on + strand at 248.528 kb on + strand at 248.529 kb on - strand at 248.529 kb on - strand at 248.529 kb on - strand at 248.537 kb on + strand at 248.537 kb on + strand at 248.537 kb on + strand at 248.538 kb on - strand at 248.538 kb on - strand at 248.538 kb on - strand at 248.620 kb on - strand at 248.626 kb on - strand at 248.638 kb on + strand at 248.639 kb on - strand at 248.672 kb on + strand at 248.672 kb on + strand at 248.672 kb on + strand at 248.673 kb on - strand at 248.673 kb on - strand at 248.673 kb on - strand at 248.673 kb on - strand at 248.673 kb on - strand at 248.702 kb on - strand at 248.861 kb on + strand, within PS417_01130 at 248.862 kb on - strand, within PS417_01130 at 249.011 kb on + strand, within PS417_01130 at 249.011 kb on + strand, within PS417_01130 at 249.011 kb on + strand, within PS417_01130 at 249.254 kb on + strand, within PS417_01130 at 249.365 kb on + strand, within PS417_01130 at 249.365 kb on + strand, within PS417_01130
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 246,244 - PS417_01120 0.60 -0.5 246,262 - PS417_01120 0.61 -0.3 246,353 + PS417_01120 0.65 -0.5 246,353 + PS417_01120 0.65 -2.8 246,354 - PS417_01120 0.65 +0.8 246,354 - PS417_01120 0.65 +0.0 246,354 - PS417_01120 0.65 +0.5 246,354 - PS417_01120 0.65 -1.5 246,354 - PS417_01120 0.65 +1.2 246,556 - PS417_01120 0.75 -0.8 246,684 + PS417_01120 0.82 -1.9 246,855 + +0.1 246,957 + -2.6 246,957 + -0.8 246,958 - -0.9 246,972 + -2.3 247,012 - +0.0 247,151 + +1.1 247,151 + +1.0 247,255 + +0.8 247,255 + +1.2 247,256 - -3.3 247,279 + -0.7 247,418 + PS417_01125 0.14 -0.8 247,463 + PS417_01125 0.18 +0.2 247,464 - PS417_01125 0.18 -1.1 247,635 - PS417_01125 0.31 +0.3 247,748 - PS417_01125 0.39 +0.0 247,748 - PS417_01125 0.39 +0.0 247,883 + PS417_01125 0.49 -1.6 247,884 - PS417_01125 0.49 +1.4 247,884 - PS417_01125 0.49 -0.3 247,884 - PS417_01125 0.49 -1.8 247,902 - PS417_01125 0.51 -2.1 247,902 - PS417_01125 0.51 +2.1 247,904 + PS417_01125 0.51 -0.6 248,103 - PS417_01125 0.66 +0.1 248,103 - PS417_01125 0.66 -1.0 248,297 + PS417_01125 0.80 -0.7 248,298 - PS417_01125 0.80 -1.6 248,352 - PS417_01125 0.84 +0.1 248,528 + +0.5 248,528 + +0.1 248,528 + -0.3 248,529 - -1.6 248,529 - +0.4 248,529 - -0.7 248,537 + +0.3 248,537 + -0.2 248,537 + -0.5 248,538 - -0.7 248,538 - +1.8 248,538 - -1.0 248,620 - +1.8 248,626 - +0.0 248,638 + +0.4 248,639 - -2.3 248,672 + +0.0 248,672 + -0.3 248,672 + +1.0 248,673 - -0.3 248,673 - +0.7 248,673 - -2.2 248,673 - +0.5 248,673 - -0.0 248,702 - +0.2 248,861 + PS417_01130 0.19 -1.6 248,862 - PS417_01130 0.19 -0.2 249,011 + PS417_01130 0.33 +0.8 249,011 + PS417_01130 0.33 -3.2 249,011 + PS417_01130 0.33 -0.3 249,254 + PS417_01130 0.57 +1.4 249,365 + PS417_01130 0.67 -1.0 249,365 + PS417_01130 0.67 +0.4
Or see this region's nucleotide sequence