Strain Fitness in Pseudomonas simiae WCS417 around PS417_10470

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,234,817	+		PS417_10465	0.34	+0.3
2,235,151	+		PS417_10465	0.64	+0.7
2,235,211	+		PS417_10465	0.70	-0.0
2,235,211	+		PS417_10465	0.70	-0.9
2,235,211	+		PS417_10465	0.70	-0.4
2,235,246	-		PS417_10465	0.73	-0.5
2,235,304	-		PS417_10465	0.78	-1.8
2,235,434	-				-1.0
2,235,436	+				-0.3
2,235,437	-				-0.3
2,235,448	+				+0.3
2,235,845	+		PS417_10470	0.18	+3.2
2,235,849	+		PS417_10470	0.19	+1.8
2,235,849	+		PS417_10470	0.19	-0.2
2,236,179	+		PS417_10470	0.50	+0.4
2,236,371	-		PS417_10470	0.68	-0.6
2,236,486	+		PS417_10470	0.79	+0.6
2,236,499	-		PS417_10470	0.80	+0.7
2,236,591	+		PS417_10470	0.89	+0.3
2,236,591	+		PS417_10470	0.89	-1.3
2,236,594	+		PS417_10470	0.89	+0.2
2,236,594	+				-0.3
2,236,612	+				+0.5
2,236,613	-				+0.1
2,236,613	-				-0.0
2,236,616	-				+0.4
2,236,616	-				+0.0
2,236,744	+				+0.7
2,236,744	+				-0.9
2,236,745	-				+1.1
2,236,745	-				+1.1
2,236,818	+				-0.9
2,236,819	-				-0.9
2,236,819	-				-0.8
2,236,868	+		PS417_10475	0.17	-0.3
2,236,869	-		PS417_10475	0.17	+0.4
2,236,872	+				+2.2
2,236,872	+		PS417_10475	0.17	-0.5
2,236,873	-		PS417_10475	0.17	-1.3
2,236,873	-		PS417_10475	0.17	-3.8
2,236,989	+		PS417_10475	0.34	-2.2
2,236,990	-		PS417_10475	0.34	+1.2
2,237,007	+		PS417_10475	0.36	+1.2
2,237,008	-		PS417_10475	0.37	-1.5
2,237,123	-		PS417_10475	0.53	+1.2
2,237,123	-		PS417_10475	0.53	+0.0
2,237,124	+		PS417_10475	0.53	-2.3
2,237,124	+		PS417_10475	0.53	-2.0
2,237,125	-		PS417_10475	0.53	+2.0
2,237,125	-		PS417_10475	0.53	-1.7
2,237,125	-		PS417_10475	0.53	+0.4
2,237,125	-		PS417_10475	0.53	-0.2
2,237,130	+		PS417_10475	0.54	+0.7
2,237,403	+				+1.0
2,237,404	-				+1.8
2,237,404	-				+0.4
2,237,404	-				-0.6
2,237,505	-				-0.6
2,237,540	-				-2.0
2,237,541	+				+0.4
2,237,542	-				+0.7
2,237,572	+				-0.2
2,237,572	+				+2.2
2,237,629	+				-0.8
2,237,663	+				-0.3
2,237,663	+				-0.8
2,237,672	-				+0.2
2,237,672	-				-0.9
2,237,695	+				-1.6