Strain Fitness in Pseudomonas simiae WCS417 around PS417_10175

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,176,440	+				-1.6
2,176,440	+				-0.7
2,176,441	-				-0.6
2,176,470	+				-0.9
2,176,570	+				-1.3
2,176,608	+				+1.4
2,176,608	+				+0.2
2,176,608	+				-2.0
2,176,609	-				-1.6
2,176,609	-				-1.0
2,176,609	-				-0.2
2,176,614	+				+1.2
2,176,615	-				+0.8
2,176,623	+				-1.6
2,176,734	+		PS417_10170	0.11	-0.6
2,176,734	+		PS417_10170	0.11	-0.8
2,176,734	+				+1.2
2,176,988	-		PS417_10170	0.52	-0.2
2,177,132	+		PS417_10170	0.75	-1.6
2,177,133	-		PS417_10170	0.75	-1.3
2,177,170	+				-0.8
2,177,170	+		PS417_10170	0.81	-1.9
2,177,170	+		PS417_10170	0.81	-3.9
2,177,171	-		PS417_10170	0.81	+1.2
2,177,171	-		PS417_10170	0.81	-0.8
2,177,256	+				+0.2
2,177,256	+				-1.4
2,177,257	-				+0.3
2,177,303	+				-0.4
2,177,304	-				+4.8
2,177,367	+				+0.6
2,177,367	+				+3.8
2,177,370	+				+0.9
2,177,370	+				-0.5
2,177,370	+				-0.2
2,177,370	+				+1.2
2,177,370	+				-0.1
2,177,371	-				+0.1
2,177,371	-				+1.2
2,177,371	-				-1.2
2,177,371	-				-2.2
2,177,371	-				+1.2
2,177,371	-				-1.0
2,177,371	-				+1.4
2,177,386	+				+1.4
2,177,386	+				-0.9
2,177,386	+				+1.2
2,177,386	+				+1.2
2,177,387	-				-0.1
2,177,387	-				+1.1
2,177,447	+		PS417_10175	0.25	+0.7
2,177,447	+		PS417_10175	0.25	+0.8
2,177,448	-		PS417_10175	0.25	-0.9
2,177,448	-		PS417_10175	0.25	+0.3
2,177,452	+		PS417_10175	0.27	-0.1
2,177,453	-		PS417_10175	0.27	-0.9
2,177,644	+		PS417_10175	0.88	+0.7
2,177,660	+				+0.6
2,177,670	-				-2.5
2,177,670	-				-0.4
2,177,713	+				+0.6
2,177,719	+				-1.1
2,177,723	-				+0.5
2,177,723	-				+1.2
2,177,784	-				+0.9
2,177,785	-				-0.8
2,177,804	-				+1.0
2,177,804	-				+1.8
2,177,860	+				-2.0
2,177,949	+				+0.8
2,178,033	-				+1.0
2,178,052	+				+0.2
2,178,077	+				+1.6
2,178,093	+				+0.6
2,178,093	+				-1.1
2,178,093	+				+1.4
2,178,096	+				-0.4
2,178,097	-				-0.2
2,178,176	+				+0.2
2,178,177	-				-0.0
2,178,239	+				-0.7
2,178,239	+				-2.1
2,178,240	-				+0.3
2,178,240	-				-0.5
2,178,240	-				-0.6
2,178,240	-				+1.8
2,178,241	+				-2.3
2,178,242	-				-0.8
2,178,242	-				+0.9
2,178,242	-				+0.0
2,178,242	-				+2.0
2,178,246	+				-0.1
2,178,329	-		PS417_10180	0.30	+0.6
2,178,329	-		PS417_10180	0.30	-0.0
2,178,329	-		PS417_10180	0.30	+1.2
2,178,334	+		PS417_10180	0.31	+0.2
2,178,334	+		PS417_10180	0.31	+0.0
2,178,334	+		PS417_10180	0.31	+1.5
2,178,335	-		PS417_10180	0.32	-1.3
2,178,335	-		PS417_10180	0.32	-0.1
2,178,335	-		PS417_10180	0.32	+0.3
2,178,336	+		PS417_10180	0.32	-0.9
2,178,336	+		PS417_10180	0.32	+2.2
2,178,336	+		PS417_10180	0.32	-1.0
2,178,336	+		PS417_10180	0.32	-0.7
2,178,336	+		PS417_10180	0.32	-0.1
2,178,337	-		PS417_10180	0.32	+1.4
2,178,337	-		PS417_10180	0.32	-0.2
2,178,399	-		PS417_10180	0.47	+1.0
2,178,432	+		PS417_10180	0.56	-0.1
2,178,432	+		PS417_10180	0.56	-0.1
2,178,432	+		PS417_10180	0.56	+0.4
2,178,433	-		PS417_10180	0.56	+0.2
2,178,455	+		PS417_10180	0.61	+0.0
2,178,456	-		PS417_10180	0.61	+0.6
2,178,456	-		PS417_10180	0.61	-0.1
2,178,586	+				+0.0
2,178,586	+				-1.3
2,178,587	-				-0.8