Strain Fitness in Pseudomonas simiae WCS417 around PS417_10150

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,170,768	-				+3.5
2,171,340	-		PS417_10145	0.51	-0.8
2,171,340	-		PS417_10145	0.51	-1.1
2,171,340	-		PS417_10145	0.51	+0.5
2,171,486	-				+2.2
2,171,486	-				+2.2
2,171,931	-		PS417_10150	0.14	-1.0
2,171,931	-				+1.2
2,171,964	-		PS417_10150	0.15	-1.4
2,172,040	-		PS417_10150	0.17	+0.4
2,172,040	-		PS417_10150	0.17	+1.5
2,172,200	+		PS417_10150	0.23	+2.2
2,172,200	+		PS417_10150	0.23	-1.2
2,172,311	-		PS417_10150	0.26	-0.4
2,172,319	+		PS417_10150	0.26	-1.4
2,172,319	+		PS417_10150	0.26	+0.8
2,172,323	-		PS417_10150	0.27	-0.9
2,172,382	+		PS417_10150	0.29	+0.2
2,172,401	-		PS417_10150	0.29	-1.1
2,172,466	+		PS417_10150	0.31	-0.3
2,172,467	-		PS417_10150	0.31	-1.0
2,172,515	+		PS417_10150	0.33	+0.8
2,172,516	-		PS417_10150	0.33	-0.7
2,172,608	+		PS417_10150	0.36	-0.2
2,172,685	+		PS417_10150	0.38	-1.0
2,172,786	+		PS417_10150	0.42	+0.8
2,172,787	-		PS417_10150	0.42	-0.9
2,173,280	+				-0.4
2,173,280	+		PS417_10150	0.58	-1.4
2,173,337	+				+1.9
2,173,337	+		PS417_10150	0.59	+0.7
2,173,538	+		PS417_10150	0.66	-0.1
2,173,741	+		PS417_10150	0.73	-0.5
2,173,742	-		PS417_10150	0.73	-3.0
2,173,799	+		PS417_10150	0.74	-3.0
2,173,862	+		PS417_10150	0.76	-0.9
2,173,863	-		PS417_10150	0.77	+0.5
2,173,863	-		PS417_10150	0.77	-0.7
2,174,075	+				+2.2
2,174,076	-		PS417_10150	0.83	+2.2
2,174,181	-		PS417_10150	0.87	-3.4
2,174,296	+				-0.4
2,174,297	-				+0.8
2,174,474	+				-0.7
2,174,482	-				-0.1
2,174,482	-				-0.7
2,174,508	+				-1.2
2,174,520	-				-1.5
2,174,536	+				-0.8
2,174,542	+				+0.8
2,174,542	+				-0.1
2,174,840	-		PS417_10155	0.75	-2.1
2,174,840	-		PS417_10155	0.75	-0.8
2,174,929	-				-0.5
2,175,113	+		PS417_10160	0.23	-1.4
2,175,114	-		PS417_10160	0.24	-0.2
2,175,114	-		PS417_10160	0.24	+0.2
2,175,114	-		PS417_10160	0.24	+0.6
2,175,117	-		PS417_10160	0.24	-1.5
2,175,135	+		PS417_10160	0.26	+1.6
2,175,135	+				+0.2
2,175,135	+		PS417_10160	0.26	-0.8
2,175,164	+		PS417_10160	0.30	+0.6
2,175,304	-		PS417_10160	0.49	-0.9
2,175,376	-		PS417_10160	0.58	+0.8