Strain Fitness in Pseudomonas simiae WCS417 around PS417_07090

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,568,058	+				-2.5
1,568,059	-				-0.4
1,568,076	-				+1.9
1,568,076	-				+0.8
1,568,076	-				+0.3
1,568,076	-				+0.9
1,568,076	-				+2.3
1,568,137	+				+2.9
1,568,137	+				-1.4
1,568,138	-				+1.3
1,568,138	-				-1.7
1,568,138	-				+0.4
1,568,138	-				-0.9
1,568,147	+				+2.6
1,568,147	+				+1.8
1,568,148	-				+0.3
1,568,277	-				+1.3
1,568,684	+		PS417_07085	0.59	+2.3
1,568,685	-		PS417_07085	0.60	-1.4
1,568,861	+				+0.7
1,568,862	-		PS417_07085	0.86	-1.1
1,568,862	-		PS417_07085	0.86	-1.1
1,568,930	+				+0.8
1,568,954	+				-0.5
1,568,954	+				-1.3
1,568,954	+				-0.1
1,568,955	-				-0.5
1,568,955	-				-1.2
1,569,040	-				-2.5
1,569,073	-				-1.3
1,569,157	-		PS417_07090	0.15	+0.6
1,569,157	-		PS417_07090	0.15	-0.9
1,569,157	-		PS417_07090	0.15	-0.7
1,569,171	-		PS417_07090	0.16	-0.8
1,569,181	-		PS417_07090	0.17	-2.7
1,569,201	+		PS417_07090	0.18	-0.7
1,569,201	+		PS417_07090	0.18	-0.7
1,569,201	+		PS417_07090	0.18	+0.3
1,569,202	-		PS417_07090	0.18	+0.5
1,569,202	-		PS417_07090	0.18	-1.1
1,569,312	+		PS417_07090	0.26	-0.8
1,569,324	+		PS417_07090	0.27	-0.8
1,569,324	+		PS417_07090	0.27	-2.0
1,569,324	+		PS417_07090	0.27	+2.3
1,569,324	+		PS417_07090	0.27	+0.1
1,569,325	-		PS417_07090	0.27	-0.7
1,569,325	-		PS417_07090	0.27	-1.2
1,569,325	-		PS417_07090	0.27	-1.2
1,569,325	-		PS417_07090	0.27	-0.9
1,569,381	-		PS417_07090	0.31	+0.1
1,569,559	+		PS417_07090	0.44	-0.5
1,570,030	+		PS417_07090	0.78	+0.5
1,570,339	+				+1.3
1,570,340	-				-1.4
1,570,471	+		PS417_07095	0.17	-0.3
1,570,471	+		PS417_07095	0.17	-0.7
1,570,471	+		PS417_07095	0.17	-1.1
1,570,471	+		PS417_07095	0.17	-1.1
1,570,471	+		PS417_07095	0.17	-0.6
1,570,472	-		PS417_07095	0.17	-0.1
1,570,472	-		PS417_07095	0.17	-1.0
1,570,472	-		PS417_07095	0.17	-1.4
1,570,502	-		PS417_07095	0.20	-0.9
1,570,613	+		PS417_07095	0.34	-2.3
1,570,660	+				-0.9
1,570,769	-		PS417_07095	0.53	-1.6
1,570,804	-		PS417_07095	0.57	-0.2
1,570,889	-		PS417_07095	0.67	+4.3
1,570,889	-		PS417_07095	0.67	+0.1
1,570,889	-		PS417_07095	0.67	+1.2
1,570,889	-		PS417_07095	0.67	+0.7
1,571,121	+				-0.5
1,571,167	+				-0.6
1,571,168	-				+0.7
1,571,227	+				+0.7
1,571,227	+				-1.1