Strain Fitness in Pseudomonas simiae WCS417 around PS417_07060

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,561,714	+		PS417_07055	0.78	-0.7
1,561,930	+		PS417_07055	0.85	+1.3
1,561,934	+		PS417_07055	0.85	+1.3
1,561,934	+		PS417_07055	0.85	-0.8
1,561,934	+		PS417_07055	0.85	-0.0
1,561,934	+		PS417_07055	0.85	+0.9
1,561,934	+		PS417_07055	0.85	+0.3
1,561,934	+		PS417_07055	0.85	+2.5
1,561,934	+		PS417_07055	0.85	+2.3
1,561,934	+		PS417_07055	0.85	+0.5
1,561,935	-		PS417_07055	0.85	-0.7
1,561,935	-		PS417_07055	0.85	-0.2
1,562,103	+				-0.5
1,562,141	+				+0.3
1,562,142	-				+1.5
1,562,142	-				+0.2
1,562,185	+				-1.2
1,562,185	+				-0.3
1,562,185	+				-0.7
1,562,185	+				-0.4
1,562,185	+				+0.9
1,562,185	+				-0.6
1,562,185	+				-0.6
1,562,186	-				-1.3
1,562,186	-				-0.2
1,562,186	-				+0.4
1,562,186	-				+0.3
1,562,186	-				-1.4
1,562,186	-				+0.1
1,562,285	+				+0.7
1,562,285	+				+0.1
1,562,285	+				+0.4
1,562,286	-				+0.3
1,562,286	-				-0.3
1,562,286	-				-1.1
1,562,329	+				+0.4
1,562,336	+				-0.7
1,562,337	-				-0.3
1,562,460	+				-0.7
1,562,490	-				-0.0
1,563,122	+		PS417_07060	0.53	-0.5
1,563,122	+		PS417_07060	0.53	-1.0
1,563,122	+		PS417_07060	0.53	-0.3
1,563,321	+		PS417_07060	0.72	-0.5
1,563,321	+		PS417_07060	0.72	-1.6
1,563,322	-		PS417_07060	0.72	+1.6
1,563,322	-				+2.3
1,563,322	-		PS417_07060	0.72	-1.7
1,563,322	-		PS417_07060	0.72	-1.2
1,563,322	-		PS417_07060	0.72	+0.7
1,563,841	-		PS417_07065	0.16	-0.7
1,563,841	-		PS417_07065	0.16	+2.3
1,563,900	+		PS417_07065	0.20	+0.6
1,564,095	+		PS417_07065	0.33	+0.3
1,564,095	+		PS417_07065	0.33	-1.7
1,564,096	-		PS417_07065	0.33	-0.0
1,564,096	-		PS417_07065	0.33	-0.3
1,564,276	-		PS417_07065	0.44	-3.4
1,564,276	-		PS417_07065	0.44	+0.2
1,564,276	-		PS417_07065	0.44	-0.5
1,564,317	-		PS417_07065	0.47	-0.3
1,564,388	-		PS417_07065	0.52	-0.5
1,564,388	-		PS417_07065	0.52	+1.0
1,564,388	-		PS417_07065	0.52	-0.8