Strain Fitness in Pseudomonas simiae WCS417 around PS417_07055

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,558,329	+		PS417_07050	0.83	-0.1
1,558,330	-		PS417_07050	0.83	-2.2
1,558,384	-		PS417_07050	0.85	-0.6
1,558,384	-		PS417_07050	0.85	-0.0
1,558,613	-				+0.6
1,558,855	+				+1.1
1,558,862	-				+0.3
1,558,890	+				-1.0
1,558,890	+				+0.6
1,558,890	+				-0.7
1,558,914	+				-1.5
1,558,915	-				-2.3
1,558,990	+				-0.0
1,559,038	+				+0.3
1,559,038	+				+1.3
1,559,038	+				-0.3
1,559,039	-				+0.3
1,559,041	-				-0.5
1,559,042	+				-0.5
1,559,042	+				+4.6
1,559,127	+				-0.3
1,559,273	+				+0.5
1,559,325	+				-1.0
1,559,327	+				-1.8
1,559,440	+				-0.4
1,559,495	-				-0.7
1,559,526	-				-0.2
1,559,643	+		PS417_07055	0.12	+0.7
1,559,692	+		PS417_07055	0.14	-0.3
1,559,692	+		PS417_07055	0.14	-0.4
1,559,730	-		PS417_07055	0.15	-1.4
1,559,730	-		PS417_07055	0.15	-0.9
1,559,823	+		PS417_07055	0.18	-1.2
1,559,895	-		PS417_07055	0.20	-0.0
1,560,063	+		PS417_07055	0.26	-1.4
1,560,118	+		PS417_07055	0.27	-1.2
1,560,377	-		PS417_07055	0.36	+0.9
1,560,502	+		PS417_07055	0.40	-1.5
1,560,503	-				+1.3
1,560,503	-		PS417_07055	0.40	-0.4
1,560,592	+		PS417_07055	0.42	-0.5
1,560,593	-		PS417_07055	0.42	-0.9
1,560,694	+		PS417_07055	0.46	+0.5
1,560,694	+		PS417_07055	0.46	-0.8
1,560,755	+		PS417_07055	0.48	-0.1
1,560,759	-		PS417_07055	0.48	+3.9
1,560,759	-		PS417_07055	0.48	-0.0
1,560,759	-		PS417_07055	0.48	-1.2
1,560,795	-		PS417_07055	0.49	-1.4
1,560,808	+		PS417_07055	0.49	-1.3
1,560,808	+		PS417_07055	0.49	-0.7
1,560,809	-		PS417_07055	0.49	-1.0
1,560,974	-		PS417_07055	0.55	-1.1
1,560,974	-				+2.3
1,560,988	+		PS417_07055	0.55	-0.6
1,560,989	-		PS417_07055	0.55	+0.3
1,560,989	-		PS417_07055	0.55	+1.2
1,560,992	+		PS417_07055	0.55	-1.2
1,560,992	+		PS417_07055	0.55	-0.3
1,560,993	-		PS417_07055	0.55	+1.0
1,560,993	-		PS417_07055	0.55	+0.3
1,561,033	-		PS417_07055	0.56	+1.3
1,561,033	-		PS417_07055	0.56	-0.2
1,561,098	-		PS417_07055	0.58	-0.6
1,561,124	+		PS417_07055	0.59	+0.6
1,561,153	+		PS417_07055	0.60	-0.4
1,561,154	-		PS417_07055	0.60	+1.5
1,561,154	-		PS417_07055	0.60	+0.7
1,561,154	-		PS417_07055	0.60	-0.0
1,561,157	+		PS417_07055	0.60	-0.7
1,561,157	+		PS417_07055	0.60	-2.2
1,561,157	+		PS417_07055	0.60	+0.1
1,561,157	+		PS417_07055	0.60	-1.2
1,561,158	-		PS417_07055	0.60	-0.6
1,561,158	-		PS417_07055	0.60	-1.7
1,561,158	-		PS417_07055	0.60	+0.1
1,561,158	-		PS417_07055	0.60	-0.9
1,561,186	-		PS417_07055	0.61	-1.0
1,561,345	-		PS417_07055	0.66	-0.0
1,561,389	+		PS417_07055	0.68	-0.8
1,561,389	+				-0.0
1,561,390	-		PS417_07055	0.68	+1.0
1,561,496	-		PS417_07055	0.71	-0.4
1,561,714	+		PS417_07055	0.78	-0.7
1,561,930	+		PS417_07055	0.85	+1.3
1,561,934	+		PS417_07055	0.85	+1.3
1,561,934	+		PS417_07055	0.85	-0.8
1,561,934	+		PS417_07055	0.85	-0.0
1,561,934	+		PS417_07055	0.85	+0.9
1,561,934	+		PS417_07055	0.85	+0.3
1,561,934	+		PS417_07055	0.85	+2.5
1,561,934	+		PS417_07055	0.85	+2.3
1,561,934	+		PS417_07055	0.85	+0.5
1,561,935	-		PS417_07055	0.85	-0.7
1,561,935	-		PS417_07055	0.85	-0.2
1,562,103	+				-0.5
1,562,141	+				+0.3
1,562,142	-				+1.5
1,562,142	-				+0.2
1,562,185	+				-1.2
1,562,185	+				-0.3
1,562,185	+				-0.7
1,562,185	+				-0.4
1,562,185	+				+0.9
1,562,185	+				-0.6
1,562,185	+				-0.6
1,562,186	-				-1.3
1,562,186	-				-0.2
1,562,186	-				+0.4
1,562,186	-				+0.3
1,562,186	-				-1.4
1,562,186	-				+0.1
1,562,285	+				+0.7
1,562,285	+				+0.1
1,562,285	+				+0.4
1,562,286	-				+0.3
1,562,286	-				-0.3
1,562,286	-				-1.1
1,562,329	+				+0.4
1,562,336	+				-0.7
1,562,337	-				-0.3
1,562,460	+				-0.7
1,562,490	-				-0.0
1,563,122	+		PS417_07060	0.53	-0.5
1,563,122	+		PS417_07060	0.53	-1.0
1,563,122	+		PS417_07060	0.53	-0.3
1,563,321	+		PS417_07060	0.72	-0.5
1,563,321	+		PS417_07060	0.72	-1.6
1,563,322	-		PS417_07060	0.72	+1.6
1,563,322	-				+2.3
1,563,322	-		PS417_07060	0.72	-1.7
1,563,322	-		PS417_07060	0.72	-1.2
1,563,322	-		PS417_07060	0.72	+0.7