Strain Fitness in Pseudomonas simiae WCS417 around PS417_07045

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,553,299	+		PS417_07040	0.61	-1.8
1,553,300	-		PS417_07040	0.61	+0.1
1,553,347	-		PS417_07040	0.64	+1.8
1,553,365	-		PS417_07040	0.65	+0.6
1,553,366	+				-0.0
1,553,366	+		PS417_07040	0.65	+0.1
1,553,366	+		PS417_07040	0.65	-1.0
1,553,366	+		PS417_07040	0.65	+0.6
1,553,366	+		PS417_07040	0.65	+0.2
1,553,366	+		PS417_07040	0.65	+0.6
1,553,366	+		PS417_07040	0.65	+0.1
1,553,366	+		PS417_07040	0.65	-0.7
1,553,366	+		PS417_07040	0.65	-0.3
1,553,367	-		PS417_07040	0.65	-0.0
1,553,367	-		PS417_07040	0.65	-1.3
1,553,367	-		PS417_07040	0.65	+0.2
1,553,436	-		PS417_07040	0.68	-1.6
1,553,436	-		PS417_07040	0.68	-1.4
1,553,534	+		PS417_07040	0.73	-1.0
1,553,535	-		PS417_07040	0.73	+0.4
1,553,535	-		PS417_07040	0.73	-0.7
1,553,627	+		PS417_07040	0.78	-0.3
1,553,627	+		PS417_07040	0.78	-1.7
1,553,628	-				+0.3
1,553,643	-		PS417_07040	0.78	+0.4
1,553,643	-		PS417_07040	0.78	+0.4
1,553,775	-		PS417_07040	0.85	-0.6
1,553,836	+		PS417_07040	0.88	-0.5
1,553,836	+		PS417_07040	0.88	-0.7
1,553,836	+		PS417_07040	0.88	-0.1
1,553,837	-				+2.3
1,553,837	-		PS417_07040	0.88	-1.7
1,553,869	+		PS417_07040	0.90	-0.1
1,553,869	+		PS417_07040	0.90	-0.3
1,553,870	-		PS417_07040	0.90	-0.8
1,553,870	-		PS417_07040	0.90	+1.1
1,553,870	-		PS417_07040	0.90	-1.1
1,553,969	+				+1.5
1,554,090	-				-0.7
1,554,110	+				+1.3
1,554,198	-				-1.1
1,554,232	+				+1.2
1,554,232	+				-1.7
1,554,233	-				-0.8
1,554,233	-				+0.6
1,554,233	-				-0.3
1,554,233	-				-0.8
1,554,233	-				-0.3
1,554,246	+				-1.4
1,554,246	+				+0.1
1,554,247	-				+0.9
1,554,247	-				+0.4
1,554,247	-				+0.7
1,554,247	-				+2.3
1,554,247	-				+0.7
1,554,247	-				-0.6
1,554,251	-				+0.3
1,554,251	-				-2.3
1,554,257	-				+2.0
1,554,266	+				-0.2
1,554,267	-				-0.7
1,554,272	+				+2.3
1,554,272	+				+0.4
1,554,272	+				-0.0
1,554,273	-				-0.4
1,554,281	+				-1.0
1,554,281	+				+4.3
1,554,284	+				-1.8
1,554,284	+				-0.0
1,554,284	+				-0.3
1,554,285	-				+0.7
1,554,384	-				-0.4
1,554,384	-				-0.5
1,554,384	-				-0.1
1,554,404	+				-0.5
1,554,430	+				-0.6
1,554,430	+				+0.8
1,554,431	-				-0.5
1,554,520	+		PS417_07045	0.13	-1.6
1,554,682	-		PS417_07045	0.21	-0.9
1,554,682	-		PS417_07045	0.21	-0.4
1,554,682	-		PS417_07045	0.21	+0.2
1,554,699	+				+1.7
1,554,699	+		PS417_07045	0.22	-0.1
1,554,699	+		PS417_07045	0.22	-3.2
1,554,700	-		PS417_07045	0.22	+0.9
1,554,700	-		PS417_07045	0.22	+1.0
1,554,700	-		PS417_07045	0.22	+0.3
1,554,719	+		PS417_07045	0.23	-1.3
1,554,720	-				+0.7
1,554,726	-		PS417_07045	0.23	+0.4
1,554,728	+		PS417_07045	0.23	-0.4
1,554,728	+		PS417_07045	0.23	+0.6
1,554,728	+		PS417_07045	0.23	-1.9
1,554,759	+		PS417_07045	0.25	-0.4
1,554,783	+		PS417_07045	0.26	+0.1
1,554,784	-		PS417_07045	0.26	-0.7
1,554,784	-		PS417_07045	0.26	-0.9
1,554,784	-		PS417_07045	0.26	+0.3
1,554,784	-		PS417_07045	0.26	+1.0
1,554,784	-		PS417_07045	0.26	+0.6
1,554,784	-		PS417_07045	0.26	+1.2
1,554,784	-		PS417_07045	0.26	-0.4
1,554,787	+		PS417_07045	0.26	-0.2
1,554,788	-		PS417_07045	0.26	-1.0
1,554,788	-		PS417_07045	0.26	-0.2
1,554,852	+				+2.3
1,554,852	+		PS417_07045	0.30	-0.0
1,554,853	-		PS417_07045	0.30	-0.7
1,554,853	-		PS417_07045	0.30	-0.5
1,554,857	+		PS417_07045	0.30	+0.3
1,554,857	+		PS417_07045	0.30	+0.3
1,554,858	-		PS417_07045	0.30	+0.3
1,554,858	-		PS417_07045	0.30	+0.4
1,554,858	-		PS417_07045	0.30	-0.8
1,554,858	-		PS417_07045	0.30	-0.7
1,554,971	+				+2.3
1,554,972	-		PS417_07045	0.36	-0.5
1,554,972	-		PS417_07045	0.36	-3.2
1,555,026	+		PS417_07045	0.38	-0.0
1,555,026	+		PS417_07045	0.38	+0.2
1,555,026	+		PS417_07045	0.38	-0.8
1,555,027	-		PS417_07045	0.38	-0.5
1,555,143	-		PS417_07045	0.44	-1.7
1,555,189	+		PS417_07045	0.47	-0.6
1,555,197	+		PS417_07045	0.47	-2.3
1,555,278	+		PS417_07045	0.51	+0.5
1,555,466	+		PS417_07045	0.61	-0.8
1,555,466	+		PS417_07045	0.61	-0.5
1,555,466	+		PS417_07045	0.61	-1.1
1,555,467	-		PS417_07045	0.61	+1.0
1,555,502	+		PS417_07045	0.63	-1.2
1,555,554	+		PS417_07045	0.65	+2.3
1,555,554	+		PS417_07045	0.65	+1.1
1,555,555	-		PS417_07045	0.65	-1.0
1,555,584	+		PS417_07045	0.67	+0.0
1,555,584	+		PS417_07045	0.67	-0.9
1,555,584	+		PS417_07045	0.67	+0.2
1,555,585	-		PS417_07045	0.67	-0.3
1,555,585	-		PS417_07045	0.67	-2.4
1,555,710	+		PS417_07045	0.73	-0.3
1,555,710	+		PS417_07045	0.73	-0.0
1,555,711	-		PS417_07045	0.73	-1.0
1,555,821	+		PS417_07045	0.79	-0.5
1,555,821	+		PS417_07045	0.79	-0.5
1,555,902	-		PS417_07045	0.83	-1.2
1,555,932	+		PS417_07045	0.85	-1.5
1,555,932	+		PS417_07045	0.85	-0.0
1,555,932	+		PS417_07045	0.85	-1.2
1,555,932	+		PS417_07045	0.85	-1.0
1,555,932	+		PS417_07045	0.85	+0.6
1,555,932	+		PS417_07045	0.85	+1.7
1,555,933	-		PS417_07045	0.85	-0.1
1,555,933	-		PS417_07045	0.85	-0.0
1,555,933	-		PS417_07045	0.85	-0.5
1,555,933	-		PS417_07045	0.85	+0.2
1,555,933	-				+0.7
1,555,933	-		PS417_07045	0.85	-1.7
1,555,981	+		PS417_07045	0.87	+0.2
1,555,981	+		PS417_07045	0.87	-0.7
1,555,982	-		PS417_07045	0.87	-0.2
1,555,982	-		PS417_07045	0.87	-1.6
1,555,982	-		PS417_07045	0.87	-0.5
1,555,982	-		PS417_07045	0.87	-0.3
1,556,007	-		PS417_07045	0.88	-0.5
1,556,007	-		PS417_07045	0.88	-1.5
1,556,014	+		PS417_07045	0.89	+0.7
1,556,014	+		PS417_07045	0.89	+1.9
1,556,014	+		PS417_07045	0.89	-0.7
1,556,015	-		PS417_07045	0.89	+1.1
1,556,015	-		PS417_07045	0.89	-1.8
1,556,015	-		PS417_07045	0.89	+0.3
1,556,064	+				-0.0
1,556,064	+				-0.3
1,556,064	+				+1.4
1,556,065	-				+0.3
1,556,066	+				-0.6
1,556,067	-				+0.7
1,556,067	-				-0.2
1,556,089	-				-0.8
1,556,192	+				-2.4
1,556,290	+				+0.1
1,556,290	+				-0.4
1,556,290	+				-0.5
1,556,290	+				+1.5
1,556,290	+				+1.3
1,556,290	+				-2.3
1,556,291	-				+0.3
1,556,291	-				+2.3
1,556,291	-				+0.9
1,556,291	-				+0.5
1,556,291	-				-2.2
1,556,313	+				-1.0
1,556,314	-				+0.2
1,556,325	+				+0.3
1,556,379	+				-1.8
1,556,380	-				-2.7
1,556,409	+				-2.0
1,556,413	+				-2.8
1,556,414	-				-0.0
1,556,426	-				-0.5
1,556,441	+				+0.1
1,556,483	+				-0.2
1,556,484	-				-0.5
1,556,485	+				-1.6
1,556,485	+				-0.6
1,556,485	+				-0.9
1,556,511	+				-2.7
1,556,511	+				+1.7
1,556,512	-				-1.8
1,556,512	-				-0.2
1,556,583	+				-0.9
1,556,584	-				+0.7
1,556,607	+				-0.4
1,556,607	+				-1.3
1,556,607	+				+0.5
1,556,607	+				-1.0
1,556,607	+				-0.5
1,556,607	+				-2.9
1,556,685	-		PS417_07050	0.11	-0.5
1,556,696	+		PS417_07050	0.11	+1.2
1,556,696	+		PS417_07050	0.11	-0.2
1,556,696	+		PS417_07050	0.11	-1.9
1,556,696	+		PS417_07050	0.11	+0.7
1,556,697	-		PS417_07050	0.12	-0.8
1,556,790	+		PS417_07050	0.16	-0.3
1,556,791	-		PS417_07050	0.16	+1.5
1,556,897	+		PS417_07050	0.20	-0.7
1,556,897	+		PS417_07050	0.20	-2.6
1,557,148	+		PS417_07050	0.31	-0.5
1,557,148	+		PS417_07050	0.31	+0.7
1,557,185	+		PS417_07050	0.33	+0.1
1,557,186	-		PS417_07050	0.33	+0.5
1,557,186	-		PS417_07050	0.33	-0.3
1,557,186	-		PS417_07050	0.33	+0.4