Strain Fitness in Pseudomonas simiae WCS417 around PS417_05645

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,269,036	+				-1.2
1,269,036	+				-1.7
1,269,037	-				-1.0
1,269,120	+				+0.3
1,269,262	-				+0.3
1,269,337	+				-2.7
1,269,436	+				+0.1
1,269,436	+				-0.0
1,269,437	-				+0.0
1,269,437	-				+0.7
1,269,437	-				+0.4
1,269,465	+				+0.3
1,269,465	+				-1.2
1,269,466	-				+0.3
1,269,543	+				-2.2
1,269,611	+				-1.7
1,269,635	-				-0.4
1,269,716	+				-3.4
1,269,815	-		PS417_05645	0.24	-0.1
1,269,854	+		PS417_05645	0.30	+1.1
1,269,854	+		PS417_05645	0.30	+0.7
1,269,873	-		PS417_05645	0.33	+0.5
1,270,035	+		PS417_05645	0.59	+0.2
1,270,035	+		PS417_05645	0.59	+0.7
1,270,036	-		PS417_05645	0.59	+0.3
1,270,036	-		PS417_05645	0.59	+1.4
1,270,133	-		PS417_05645	0.74	+2.3
1,270,197	-		PS417_05645	0.84	-2.0
1,270,212	+		PS417_05645	0.87	+3.3
1,270,213	-		PS417_05645	0.87	-2.2
1,270,213	-		PS417_05645	0.87	-0.5
1,270,292	-				+0.6
1,270,294	-				+1.3
1,270,294	-				-0.5
1,270,308	+				-1.4
1,270,308	+				+2.3
1,270,309	-				+0.2
1,270,309	-				-0.6
1,270,309	-				-2.2
1,270,309	-				-2.2
1,270,309	-				-1.2
1,270,445	+		PS417_05650	0.36	-1.6
1,270,445	+		PS417_05650	0.36	+2.3
1,270,500	+		PS417_05650	0.66	-0.0
1,270,500	+		PS417_05650	0.66	-0.5
1,270,501	-				+0.7
1,270,501	-		PS417_05650	0.66	-0.2
1,270,562	+				-0.7
1,270,562	+				+2.0
1,270,562	+				-0.6
1,270,563	-				-0.3
1,270,580	-				-0.9
1,270,601	+				-2.4
1,270,602	-				+0.1
1,270,604	-				-1.4
1,270,604	-				-1.3
1,270,755	+		PS417_05655	0.13	+0.1
1,270,755	+		PS417_05655	0.13	-1.8
1,270,756	-				-0.5
1,270,889	-		PS417_05655	0.34	+1.3
1,270,889	-		PS417_05655	0.34	-0.7
1,271,065	-		PS417_05655	0.62	-0.3
1,271,086	-		PS417_05655	0.65	-0.3
1,271,115	+		PS417_05655	0.70	-0.5
1,271,115	+		PS417_05655	0.70	+2.3
1,271,115	+		PS417_05655	0.70	+0.1
1,271,115	+				-0.5