Strain Fitness in Pseudomonas simiae WCS417 around PS417_04120
Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 5 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
925,203 | - | +0.8 | |||
925,203 | - | -1.0 | |||
925,245 | - | -1.1 | |||
925,426 | - | PS417_04115 | 0.22 | +1.1 | |
925,426 | - | PS417_04115 | 0.22 | +0.8 | |
925,433 | + | PS417_04115 | 0.23 | +0.5 | |
925,474 | - | PS417_04115 | 0.29 | +0.6 | |
925,524 | + | PS417_04115 | 0.37 | +1.0 | |
925,801 | + | PS417_04115 | 0.81 | +0.3 | |
925,935 | + | -0.3 | |||
927,479 | + | +1.1 | |||
927,550 | + | PS417_04125 | 0.15 | -0.9 | |
927,890 | + | PS417_04125 | 0.46 | -0.0 |
Or see this region's nucleotide sequence