Strain Fitness in Pseudomonas simiae WCS417 around PS417_20835

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
4,523,448	+				-1.3
4,523,493	+		PS417_20830	0.27	-0.7
4,523,494	-		PS417_20830	0.27	+0.1
4,523,509	-		PS417_20830	0.29	-0.7
4,523,637	+		PS417_20830	0.42	-0.6
4,523,637	+		PS417_20830	0.42	+2.3
4,523,637	+		PS417_20830	0.42	-0.5
4,523,637	+		PS417_20830	0.42	+0.8
4,523,638	-		PS417_20830	0.42	-0.9
4,523,638	-		PS417_20830	0.42	-0.5
4,523,638	-		PS417_20830	0.42	+1.5
4,523,694	+		PS417_20830	0.48	-0.4
4,523,694	+		PS417_20830	0.48	-0.3
4,523,987	+		PS417_20830	0.79	-0.9
4,524,159	-				+0.0
4,524,163	+				-0.2
4,524,164	-				-0.6
4,524,164	-				-0.2
4,524,164	-				-0.7
4,524,164	-				-0.3
4,524,256	-				+1.5
4,524,491	+		PS417_20835	0.23	+0.2
4,524,502	+		PS417_20835	0.24	-1.2
4,524,503	-		PS417_20835	0.24	-0.9
4,524,626	+		PS417_20835	0.39	-1.4
4,524,786	+		PS417_20835	0.57	-0.5
4,524,936	-		PS417_20835	0.74	+1.7
4,524,936	-		PS417_20835	0.74	-0.8
4,525,135	-				-1.5
4,525,135	-				-0.0
4,525,192	-				+1.3
4,525,192	-				+0.1
4,525,192	-				+0.6
4,525,192	-				+0.6
4,525,192	-				+0.3
4,525,200	-				+0.1
4,525,241	+				+0.3
4,525,355	+		PS417_20840	0.24	+0.1
4,525,355	+		PS417_20840	0.24	+0.4
4,525,356	-		PS417_20840	0.24	+0.1
4,525,356	-		PS417_20840	0.24	-1.6
4,525,365	+		PS417_20840	0.26	+1.0
4,525,365	+		PS417_20840	0.26	+0.1
4,525,398	-		PS417_20840	0.31	+1.1
4,525,398	-		PS417_20840	0.31	-0.3
4,525,620	-		PS417_20840	0.69	-0.0
4,525,664	+		PS417_20840	0.76	+0.3
4,525,664	+		PS417_20840	0.76	+1.6
4,525,664	+		PS417_20840	0.76	-0.1
4,525,715	+		PS417_20840	0.85	+0.4
4,525,716	-				+2.3
4,525,789	+				+0.3
4,525,790	-				+0.4
4,525,790	-				-1.7
4,525,794	-				+0.5
4,525,854	+				+0.1
4,525,855	-				-0.1
4,525,855	-				-0.2
4,525,855	-				+1.3
4,525,878	+				+0.6
4,525,878	+				+0.3
4,525,879	-				+0.5
4,525,879	-				-0.3
4,525,879	-				-1.4
4,525,882	+				-0.3
4,525,882	+				+1.0
4,525,882	+				+0.4
4,525,883	-				+0.1
4,525,883	-				-0.2
4,525,883	-				+0.1
4,525,883	-				-0.3
4,525,883	-				+1.3
4,525,965	-		PS417_20845	0.15	-0.6
4,525,965	-		PS417_20845	0.15	+3.3
4,525,965	-		PS417_20845	0.15	-0.5