Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17485 and PS417_17490 overlap by 4 nucleotides PS417_17490 and PS417_17495 overlap by 4 nucleotides PS417_17495 and PS417_17500 are separated by 108 nucleotides PS417_17500 and PS417_17505 are separated by 15 nucleotides
PS417_17485: PS417_17485 - membrane protein, at 3,820,038 to 3,820,997
_17485
PS417_17490: PS417_17490 - ABC transporter ATP-binding protein, at 3,820,994 to 3,821,734
_17490
PS417_17495: PS417_17495 - multidrug ABC transporter permease, at 3,821,731 to 3,822,522
_17495
PS417_17500: PS417_17500 - sulfurtransferase, at 3,822,631 to 3,823,179
_17500
PS417_17505: PS417_17505 - LuxR family transcriptional regulator, at 3,823,195 to 3,823,860
_17505
Position (kb)
3821
3822
3823 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3820.752 kb on + strand, within PS417_17485 at 3820.752 kb on + strand, within PS417_17485 at 3820.824 kb on + strand, within PS417_17485 at 3820.824 kb on + strand, within PS417_17485 at 3820.862 kb on + strand, within PS417_17485 at 3821.150 kb on + strand, within PS417_17490 at 3821.556 kb on + strand, within PS417_17490 at 3821.556 kb on + strand, within PS417_17490 at 3821.741 kb on - strand at 3821.905 kb on + strand, within PS417_17495 at 3821.905 kb on + strand, within PS417_17495 at 3821.905 kb on + strand, within PS417_17495 at 3821.906 kb on - strand, within PS417_17495 at 3821.923 kb on + strand, within PS417_17495 at 3821.992 kb on + strand, within PS417_17495 at 3822.103 kb on + strand at 3822.104 kb on - strand, within PS417_17495 at 3822.130 kb on + strand, within PS417_17495 at 3822.407 kb on - strand, within PS417_17495 at 3822.540 kb on - strand at 3822.598 kb on + strand at 3822.959 kb on - strand, within PS417_17500 at 3822.976 kb on + strand, within PS417_17500 at 3822.982 kb on + strand, within PS417_17500 at 3822.982 kb on + strand, within PS417_17500 at 3822.983 kb on - strand, within PS417_17500 at 3823.018 kb on + strand, within PS417_17500 at 3823.080 kb on + strand, within PS417_17500 at 3823.080 kb on + strand, within PS417_17500 at 3823.081 kb on - strand, within PS417_17500 at 3823.090 kb on + strand, within PS417_17500 at 3823.177 kb on + strand at 3823.199 kb on - strand at 3823.422 kb on + strand, within PS417_17505 at 3823.484 kb on - strand, within PS417_17505 at 3823.484 kb on - strand, within PS417_17505
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 3,820,752 + PS417_17485 0.74 -1.6 3,820,752 + PS417_17485 0.74 -1.3 3,820,824 + PS417_17485 0.82 +0.2 3,820,824 + PS417_17485 0.82 +1.6 3,820,862 + PS417_17485 0.86 -1.5 3,821,150 + PS417_17490 0.21 -1.0 3,821,556 + PS417_17490 0.76 -0.0 3,821,556 + PS417_17490 0.76 -2.4 3,821,741 - -0.6 3,821,905 + PS417_17495 0.22 -0.7 3,821,905 + PS417_17495 0.22 -0.5 3,821,905 + PS417_17495 0.22 -1.3 3,821,906 - PS417_17495 0.22 -1.0 3,821,923 + PS417_17495 0.24 -0.0 3,821,992 + PS417_17495 0.33 -1.4 3,822,103 + -0.4 3,822,104 - PS417_17495 0.47 +0.6 3,822,130 + PS417_17495 0.50 -1.9 3,822,407 - PS417_17495 0.85 -0.7 3,822,540 - -0.0 3,822,598 + -0.2 3,822,959 - PS417_17500 0.60 -0.5 3,822,976 + PS417_17500 0.63 -0.4 3,822,982 + PS417_17500 0.64 +0.6 3,822,982 + PS417_17500 0.64 +1.9 3,822,983 - PS417_17500 0.64 -0.3 3,823,018 + PS417_17500 0.70 +0.7 3,823,080 + PS417_17500 0.82 -0.7 3,823,080 + PS417_17500 0.82 -0.3 3,823,081 - PS417_17500 0.82 -1.1 3,823,090 + PS417_17500 0.84 +1.0 3,823,177 + +0.1 3,823,199 - -1.4 3,823,422 + PS417_17505 0.34 -2.4 3,823,484 - PS417_17505 0.43 +1.3 3,823,484 - PS417_17505 0.43 -0.5
Or see this region's nucleotide sequence