Strain Fitness in Pseudomonas simiae WCS417 around PS417_17055

Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 5 mg/mL (C)
3,725,500	-		PS417_17045	0.68	+1.7
3,725,500	-		PS417_17045	0.68	+0.5
3,725,576	+				-0.2
3,725,654	+		PS417_17045	0.81	+0.6
3,725,654	+		PS417_17045	0.81	+0.6
3,725,654	+		PS417_17045	0.81	+2.3
3,725,655	-				-2.2
3,725,655	-		PS417_17045	0.81	+0.7
3,725,723	+		PS417_17045	0.87	-3.3
3,726,005	+		PS417_17050	0.30	+1.5
3,726,043	+		PS417_17050	0.38	-0.1
3,726,043	+		PS417_17050	0.38	-0.2
3,726,044	-		PS417_17050	0.39	-0.1
3,726,044	-		PS417_17050	0.39	+0.2
3,726,081	-				-0.0
3,726,349	+				-0.6
3,726,415	-				-0.4
3,726,449	+				-0.0
3,726,449	+				-1.0
3,726,450	-				+0.1
3,726,453	-				+0.1
3,726,496	+				-0.3
3,726,499	+				-1.3
3,726,500	-				-0.0
3,726,500	-				+2.0
3,727,004	-		PS417_17055	0.46	-0.8
3,727,202	+		PS417_17055	0.62	-0.9
3,727,203	-		PS417_17055	0.62	-1.9
3,727,396	+		PS417_17055	0.77	+0.0
3,727,440	+		PS417_17055	0.80	-0.8
3,727,440	+		PS417_17055	0.80	-1.9
3,727,440	+		PS417_17055	0.80	+0.6
3,727,441	-		PS417_17055	0.80	-0.4
3,727,495	+		PS417_17055	0.85	-0.8
3,727,495	+		PS417_17055	0.85	-0.9
3,727,495	+		PS417_17055	0.85	-0.4
3,727,496	-		PS417_17055	0.85	-0.3
3,727,496	-		PS417_17055	0.85	+0.2
3,727,496	-		PS417_17055	0.85	-2.2
3,727,496	-		PS417_17055	0.85	-1.0
3,727,496	-		PS417_17055	0.85	-0.2
3,727,561	+		PS417_17055	0.90	-0.3
3,727,561	+		PS417_17055	0.90	-0.0
3,727,691	-				-0.9
3,727,697	+				-0.7
3,728,191	+				+0.2
3,728,192	-				-0.6
3,728,352	-		PS417_17065	0.20	+1.0
3,728,352	-		PS417_17065	0.20	+0.7
3,728,527	-				+2.6
3,728,608	+		PS417_17065	0.44	-0.4
3,728,609	-		PS417_17065	0.44	-0.2