Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14585 and PS417_14590 are separated by 94 nucleotides PS417_14590 and PS417_14595 overlap by 6 nucleotides PS417_14595 and PS417_14600 are separated by 116 nucleotides PS417_14600 and PS417_14605 are separated by 147 nucleotides
PS417_14585: PS417_14585 - MFS transporter, at 3,189,216 to 3,190,382
_14585
PS417_14590: PS417_14590 - LysR family transcriptional regulator, at 3,190,477 to 3,191,370
_14590
PS417_14595: PS417_14595 - pyrroline-5-carboxylate reductase, at 3,191,365 to 3,192,138
_14595
PS417_14600: PS417_14600 - bleomycin resistance protein, at 3,192,255 to 3,192,611
_14600
PS417_14605: PS417_14605 - adenylate kinase, at 3,192,759 to 3,193,301
_14605
Position (kb)
3191
3192
3193 Strain fitness (log2 ratio)
-1
0
1 at 3190.384 kb on + strand at 3190.435 kb on + strand at 3190.444 kb on + strand at 3190.511 kb on + strand at 3190.628 kb on + strand at 3190.628 kb on + strand, within PS417_14590 at 3190.629 kb on - strand, within PS417_14590 at 3190.875 kb on - strand, within PS417_14590 at 3191.366 kb on + strand at 3191.368 kb on + strand at 3191.440 kb on - strand at 3191.440 kb on - strand at 3191.608 kb on - strand, within PS417_14595 at 3191.639 kb on + strand, within PS417_14595 at 3191.892 kb on + strand, within PS417_14595 at 3191.893 kb on - strand, within PS417_14595 at 3191.893 kb on - strand, within PS417_14595 at 3192.177 kb on + strand at 3192.177 kb on + strand at 3192.178 kb on - strand at 3192.178 kb on - strand at 3192.218 kb on - strand at 3192.218 kb on - strand at 3192.269 kb on + strand at 3192.379 kb on - strand, within PS417_14600 at 3192.379 kb on - strand, within PS417_14600 at 3192.534 kb on - strand, within PS417_14600 at 3192.534 kb on - strand, within PS417_14600 at 3192.587 kb on - strand at 3192.587 kb on - strand at 3192.682 kb on + strand at 3192.716 kb on + strand at 3192.717 kb on - strand at 3192.773 kb on + strand at 3192.773 kb on + strand at 3192.774 kb on - strand at 3192.862 kb on - strand, within PS417_14605 at 3193.106 kb on + strand, within PS417_14605 at 3193.107 kb on - strand, within PS417_14605 at 3193.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 3,190,384 + +0.5 3,190,435 + +1.2 3,190,444 + -0.2 3,190,511 + +0.6 3,190,628 + +1.1 3,190,628 + PS417_14590 0.17 -1.0 3,190,629 - PS417_14590 0.17 -0.2 3,190,875 - PS417_14590 0.45 +0.5 3,191,366 + -0.1 3,191,368 + -0.4 3,191,440 - -0.2 3,191,440 - +0.1 3,191,608 - PS417_14595 0.31 +0.6 3,191,639 + PS417_14595 0.35 +1.2 3,191,892 + PS417_14595 0.68 +0.5 3,191,893 - PS417_14595 0.68 +0.3 3,191,893 - PS417_14595 0.68 -0.7 3,192,177 + -1.1 3,192,177 + -1.3 3,192,178 - -0.7 3,192,178 - +0.0 3,192,218 - +0.3 3,192,218 - -0.6 3,192,269 + -0.2 3,192,379 - PS417_14600 0.35 +1.2 3,192,379 - PS417_14600 0.35 +0.5 3,192,534 - PS417_14600 0.78 +0.2 3,192,534 - PS417_14600 0.78 -0.7 3,192,587 - +1.0 3,192,587 - -1.2 3,192,682 + +0.5 3,192,716 + -0.4 3,192,717 - +0.0 3,192,773 + -1.3 3,192,773 + -0.7 3,192,774 - +0.1 3,192,862 - PS417_14605 0.19 +0.4 3,193,106 + PS417_14605 0.64 -0.2 3,193,107 - PS417_14605 0.64 -0.7 3,193,107 - -0.5
Or see this region's nucleotide sequence