Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09440 and PS417_09445 are separated by 101 nucleotides PS417_09445 and PS417_09450 overlap by 12 nucleotides PS417_09450 and PS417_09455 are separated by 11 nucleotides
PS417_09440: PS417_09440 - MerR family transcriptional regulator, at 2,045,340 to 2,045,795
_09440
PS417_09445: PS417_09445 - antibiotic biosynthesis monooxygenase, at 2,045,897 to 2,046,262
_09445
PS417_09450: PS417_09450 - Fis family transcriptional regulator, at 2,046,251 to 2,047,354
_09450
PS417_09455: PS417_09455 - monooxygenase, at 2,047,366 to 2,048,553
_09455
Position (kb)
2046
2047
2048 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2045.330 kb on + strand at 2045.456 kb on + strand, within PS417_09440 at 2045.722 kb on + strand, within PS417_09440 at 2045.876 kb on + strand at 2045.904 kb on + strand at 2045.905 kb on - strand at 2045.905 kb on - strand at 2046.077 kb on + strand, within PS417_09445 at 2046.078 kb on - strand, within PS417_09445 at 2046.260 kb on + strand at 2046.569 kb on + strand, within PS417_09450 at 2046.570 kb on - strand, within PS417_09450 at 2046.660 kb on + strand, within PS417_09450 at 2046.660 kb on + strand, within PS417_09450 at 2046.661 kb on - strand, within PS417_09450 at 2046.661 kb on - strand, within PS417_09450 at 2046.661 kb on - strand, within PS417_09450 at 2046.726 kb on + strand, within PS417_09450 at 2047.277 kb on - strand at 2047.730 kb on + strand, within PS417_09455 at 2047.730 kb on + strand, within PS417_09455 at 2047.731 kb on - strand, within PS417_09455 at 2047.731 kb on - strand, within PS417_09455 at 2047.764 kb on + strand, within PS417_09455 at 2047.793 kb on + strand, within PS417_09455 at 2047.793 kb on + strand, within PS417_09455 at 2047.794 kb on - strand, within PS417_09455 at 2047.794 kb on - strand, within PS417_09455 at 2047.794 kb on - strand, within PS417_09455 at 2047.839 kb on + strand, within PS417_09455 at 2047.839 kb on + strand, within PS417_09455 at 2047.839 kb on + strand, within PS417_09455 at 2047.840 kb on - strand, within PS417_09455 at 2047.840 kb on - strand at 2047.840 kb on - strand, within PS417_09455 at 2047.840 kb on - strand, within PS417_09455 at 2047.840 kb on - strand, within PS417_09455 at 2047.840 kb on - strand, within PS417_09455
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 2,045,330 + +0.2 2,045,456 + PS417_09440 0.25 -1.2 2,045,722 + PS417_09440 0.84 +0.2 2,045,876 + +0.0 2,045,904 + +1.9 2,045,905 - -2.4 2,045,905 - -0.9 2,046,077 + PS417_09445 0.49 +0.0 2,046,078 - PS417_09445 0.49 -0.2 2,046,260 + +0.4 2,046,569 + PS417_09450 0.29 -0.3 2,046,570 - PS417_09450 0.29 -0.2 2,046,660 + PS417_09450 0.37 +1.0 2,046,660 + PS417_09450 0.37 +0.0 2,046,661 - PS417_09450 0.37 +0.6 2,046,661 - PS417_09450 0.37 +1.2 2,046,661 - PS417_09450 0.37 +1.2 2,046,726 + PS417_09450 0.43 +0.4 2,047,277 - -0.7 2,047,730 + PS417_09455 0.31 +0.4 2,047,730 + PS417_09455 0.31 -0.3 2,047,731 - PS417_09455 0.31 -2.0 2,047,731 - PS417_09455 0.31 -0.7 2,047,764 + PS417_09455 0.34 -0.0 2,047,793 + PS417_09455 0.36 -0.2 2,047,793 + PS417_09455 0.36 +0.1 2,047,794 - PS417_09455 0.36 -0.4 2,047,794 - PS417_09455 0.36 +0.2 2,047,794 - PS417_09455 0.36 +1.4 2,047,839 + PS417_09455 0.40 +0.3 2,047,839 + PS417_09455 0.40 +0.3 2,047,839 + PS417_09455 0.40 +1.4 2,047,840 - PS417_09455 0.40 -0.4 2,047,840 - +1.6 2,047,840 - PS417_09455 0.40 -0.0 2,047,840 - PS417_09455 0.40 -0.1 2,047,840 - PS417_09455 0.40 -0.7 2,047,840 - PS417_09455 0.40 +0.3
Or see this region's nucleotide sequence